RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 AQP9O43315 295 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 EGFP01133 1207 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PSMB5P28074 263 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 CCR7P32248 378 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 ESCO2Q56NI9 601 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 ANKRD13BQ86YJ7 626 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 NR4A2P43354 598 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 ERV3-1Q14264 604 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 P2RY14Q15391 338 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 SIX1Q15475 284 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 FAM198BQ6UWH4 519 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 TPRA1Q86W33 373 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 MEX3DQ86XN8 651 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 OR13J1Q8NGT2 312 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 ADAMTS16Q8TE57 1224 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 SDSLQ96GA7 329 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 CA5BQ9Y2D0 317 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 HCFC2Q9Y5Z7 792 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 GPR75O95800 540 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 MSR1P21757 451 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 GJA4P35212 333 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 KEAP1Q14145 624 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 RPE65Q16518 533 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 DNAJC22Q8N4W6 341 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 SYNPRQ8TBG9 265 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 FOXRED1Q96CU9 486 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 PFDN5Q99471 154 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 MICU1Q9BPX6 476 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 TRAV27A0A087WT01 109 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 ANKRD33BA6NCL7 494 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 F5H5P2 479 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 LYRM1O43325 122 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC43A1O75387 559 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 ALDOBP05062 364 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 AKAIN1P0CW23 69 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 OR1D4P47884 311 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 POU3F1Q03052 451 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 PIGCQ92535 297 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 BIRC8Q96P09 236 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 HHLA2Q9UM44 414 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 TPPPO94811 219 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 KCNK5O95279 499 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 CCNJQ5T5M9 372 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 OR14A16Q8NHC5 309 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 MALSU1Q96EH3 234 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 AMDHD1Q96NU7 426 aa17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 COL2A1P02458 1487 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-203ENST00000535236 BDKRB2P30411 391 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC6A19Q695T7 634 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ACOT11Q8WXI4 607 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 NICN1Q9BSH3 213 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 LHPPQ9H008 270 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 SAP130Q9H0E3 1048 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 KLHL42Q9P2K6 505 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ASB4Q9Y574 426 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 NAP1L6A6NFF2 107 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 GAAP10253 952 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 CD79BP40259 229 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF169Q14929 603 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 FAM78AQ5JUQ0 283 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 MANEAQ5SRI9 462 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 STK35Q8TDR2 534 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF480Q8WV37 535 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ITFG2Q969R8 447 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 SIGLEC6O43699 453 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 CXCR4P61073 352 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 RPL23AP62750 156 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ENTPD8Q5MY95 495 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 BPHLQ86WA6 291 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 FNDC9Q8TBE3 224 aa17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF334Q9HCZ1 680 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 TEX10Q9NXF1 929 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-203ENST00000535236 SRPX2O60687 465 aaPredicted RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 ITGB8P26012 769 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 ALDH3B1P43353 468 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 SMAD2Q15796 467 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC14A2Q15849 920 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC22A6Q4U2R8 563 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 PLAG1Q6DJT9 500 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 HYLS1Q96M11 299 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 UTP23Q9BRU9 249 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 OR52D1Q9H346 318 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 DDX31Q9H8H2 851 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF223Q9UK11 482 aaPredicted RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 SIT1Q9Y3P8 196 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 TNFSF12O43508 249 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 RRADP55042 308 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 AGAP7PQ5VUJ5 663 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 AGAP6Q5VW22 663 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 OR4D6Q8NGJ1 314 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 AGAP4Q96P64 663 aa17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 DCAF13Q9NV06 445 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-203ENST00000535236 A8MXE2 369 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 STT3AP46977 705 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 PPP5CP53041 499 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 YPEL5P62699 121 aa17.01■□□□□ 0.31
SFSWAP-203ENST00000535236 OR1Q1Q15612 314 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms