RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 UGT2B10P36537 528 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 PGM1P36871 562 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 CD79BP40259 229 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 CLK3P49761 638 aaKnown RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 P2RX1P51575 399 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SESN3P58005 492 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 RAC1P63000 192 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 PSPHP78330 225 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SF3A3Q12874 501 aaKnown RBP eCLIP8.59□□□□□ -1.036e-12■■■■■ 79.1
SSBP3-215ENST00000533946 ZNF141Q15928 474 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SMU1Q2TAY7 513 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 TIGD2Q4W5G0 525 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 RPS26P11Q5JNZ5 115 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 NXNQ6DKJ4 435 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 FUNDC1Q8IVP5 155 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 TUSC5Q8IXB3 177 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 MSRB3Q8IXL7 192 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 TMCO5AQ8N6Q1 288 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 GOT1L1Q8NHS2 421 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 MIPOL1Q8TD10 442 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ACTRT2Q8TDY3 377 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 TESCQ96BS2 214 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 NEURL3Q96EH8 262 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 MAELQ96JY0 434 aaKnown RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ARL5BQ96KC2 179 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 KLHL15Q96M94 604 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 OR52E6Q96RD3 313 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF300Q96RE9 604 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SMR3AQ99954 134 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 KLHL4Q9C0H6 718 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SLC38A1Q9H2H9 487 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ATAD3AQ9NVI7 634 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 C2CD3Q4AC94 2353 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 USF3Q68DE3 2245 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ARID1AO14497 2285 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 A0A087WZY1 265 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZC3H12DA2A288 527 aaKnown RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 SMAD9O15198 467 aaKnown RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF264O43296 627 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 KIAA0513O60268 411 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 DNAJA2O60884 412 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 SS18L1O75177 396 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 PGRP06401 933 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 UBL4AP11441 157 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 HPGDP15428 266 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF17P17021 662 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 HOXB9P17482 250 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 AGTR1P30556 359 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 GCKP35557 465 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 RPL3P39023 403 aaKnown RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF41P51814 821 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 CARD18P57730 90 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 HOXC5Q00444 222 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 FGFBP1Q14512 234 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF239Q16600 458 aaKnown RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 SLC2A7Q6PXP3 512 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 STAC2Q6ZMT1 411 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF621Q6ZSS3 439 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 FAM214BQ7L5A3 538 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 CHMP1BQ7LBR1 199 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 VRK2Q86Y07 508 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF619Q8N2I2 560 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 FAM71CQ8NEG0 241 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 WFDC11Q8NEX6 87 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 OR5W2Q8NH69 310 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZBTB8AQ96BR9 441 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 PRPF18Q99633 342 aaKnown RBP8.58□□□□□ -1.04
SSBP3-215ENST00000533946 WFDC6Q9BQY6 131 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 IKZF5Q9H5V7 419 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 SLC52A3Q9NQ40 469 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 CTPS2Q9NRF8 586 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 PRSS50Q9UI38 385 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 BTNL2Q9UIR0 455 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 ZNF175Q9Y473 711 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 DSCAMO60469 2012 aa8.58□□□□□ -1.04
SSBP3-215ENST00000533946 KLF4O43474 513 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 FRS3O43559 492 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 STX11O75558 287 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 GCM2O75603 506 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CSTAP01040 98 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 IGHV3-9P01782 118 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 TUBBP07437 444 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 GKN3PP0CG01 181 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 POU2F1P14859 743 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CD53P19397 219 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 CHI3L1P36222 383 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-215ENST00000533946 IDH3AP50213 366 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 SORDQ00796 357 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 MAD2L1Q13257 205 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-215ENST00000533946 GPAT3Q53EU6 434 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 SLC25A53Q5H9E4 307 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 PAGE3Q5JUK9 113 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 EPGNQ6UW88 154 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 SEZ6L2Q6UXD5 910 aa8.57□□□□□ -1.04
SSBP3-215ENST00000533946 SPNS3Q6ZMD2 512 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms