RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 FXYD4P59646 89 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CSNK2A1P68400 391 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ERV3-1Q14264 604 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CNN3Q15417 329 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 PAN3Q58A45 887 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ATPAF1Q5TC12 328 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 C6orf89Q6UWU4 347 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CCDC28AQ8IWP9 274 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CSNK2A3Q8NEV1 391 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 OR4D6Q8NGJ1 314 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RNF128Q8TEB7 428 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SENP5Q96HI0 755 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SLC45A3Q96JT2 553 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 POTEKPQ9BYX7 375 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 GXYLT2A0PJZ3 443 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 HIST1H1TP22492 207 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 HOXC8P31273 242 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ETV4P43268 484 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 OR1D4P47884 311 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 HK3P52790 923 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 LGALS4P56470 323 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TGFBR3Q03167 851 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TMEM52BQ4KMG9 183 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ARHGAP11AQ6P4F7 1023 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TLDC1Q6P9B6 456 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 C19orf47Q8N9M1 422 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 OR5D16Q8NGK9 328 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SLC41A3Q96GZ6 507 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 PDLIM5Q96HC4 596 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SPIN2AQ99865 258 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SPIN2BQ9BPZ2 258 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 DHRS4Q9BTZ2 278 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 FAM117AQ9C073 453 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SAV1Q9H4B6 383 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 MAGIXQ9H6Y5 334 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ZNF160Q9HCG1 818 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 BTNL2Q9UIR0 455 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TMEM184BQ9Y519 407 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 H0YGG7 62 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TOR1AO14656 332 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 DHRS4L1P0CG22 281 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 AGTR1P30556 359 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 PGFP49763 221 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 HNRNPA0Q13151 305 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 PAGE3Q5JUK9 113 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 OR52R1Q8NGF1 315 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 UCN3Q969E3 161 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TBC1D20Q96BZ9 403 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 RDH12Q96NR8 316 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TSNAXQ99598 290 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SOX17Q9H6I2 414 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 A8MVM7 634 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 EEF1E1-BLOC1S5C9J1V9 151 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 H3BML4 177 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 EEF1E1O43324 174 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SYT7O43581 403 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SCRG1O75711 98 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 MAS1P04201 325 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 MTHFD2P13995 350 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CD46P15529 392 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SFTPDP35247 375 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 P2RX1P51575 399 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TMEM71Q6P5X7 295 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 BEST3Q8N1M1 668 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CNIH3Q8TBE1 160 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CNOT9Q92600 299 aaKnown RBP8.19□□□□□ -1.1
CTNND1-232ENST00000532649 SORT1Q99523 831 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 CCDC32Q9BV29 185 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 ENKD1Q9H0I2 346 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 EMCNQ9ULC0 261 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 LRRC42Q9Y546 428 aa8.19□□□□□ -1.1
CTNND1-232ENST00000532649 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 TRAPPC13A5PLN9 417 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 TNFSF12O43508 249 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 SULT1B1O43704 296 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 SERPINE2P07093 398 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 ELK4P28324 431 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 EXOSC7Q15024 291 aaKnown RBP8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NKAIN2Q5VXU1 208 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 WBP2Q969T9 261 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 EXTL2Q9UBQ6 330 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NPIPA5A0A0B4J1W7 369 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 TRBV11-1A0A0K0K1C0 115 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NKX6-3A6NJ46 265 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 GABRR3A8MPY1 467 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 CEBPZOSA8MTT3 80 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NPIPA7E9PJI5 369 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NME4O00746 187 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 MMP2P08253 660 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 NPIPA8P0DM63 369 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 CD27P26842 260 aa8.18□□□□□ -1.1
CTNND1-232ENST00000532649 ETV5P41161 510 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms