RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 SMNDC1O75940 238 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTSB-225ENST00000532409 TGDSO95455 350 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 NTN1O95631 604 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 AGR2O95994 175 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 ETFAP13804 333 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 CPOXP36551 454 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 PGM1P36871 562 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 CPA2P48052 419 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 RPS3AP61247 264 aaKnown RBP13.91□□□□□ -0.18
CTSB-225ENST00000532409 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 NRGNQ92686 78 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 ITCHQ96J02 903 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 MAGEB18Q96M61 343 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 CCDC28BQ9BUN5 200 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 SRXN1Q9BYN0 137 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 LAT2Q9GZY6 243 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 OPN3Q9H1Y3 402 aaPredicted RBP13.91□□□□□ -0.18
CTSB-225ENST00000532409 SLC38A1Q9H2H9 487 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 HHATLQ9HCP6 504 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 PACSIN3Q9UKS6 424 aa13.91□□□□□ -0.18
CTSB-225ENST00000532409 ANKRD17O75179 2603 aaKnown RBP13.91□□□□□ -0.18
CTSB-225ENST00000532409 EIF4E2O60573 245 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 ANP32DO95626 131 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 ME2P23368 584 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 RYKP34925 604 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 EIF1P41567 113 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 STX1BP61266 288 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 HPCAP84074 193 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 LRRC74AQ0VAA2 488 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 CBFBQ13951 182 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 GUSBP1Q15486 140 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 HBMQ6B0K9 141 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 EIF3MQ7L2H7 374 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 TMEM200AQ86VY9 491 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 FAM71CQ8NEG0 241 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 TOR1AIP2Q8NFQ8 470 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 CNOT9Q92600 299 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 GTF2H4Q92759 462 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 OSTF1Q92882 214 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 KLHL15Q96M94 604 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 PAIP1Q9H074 479 aaKnown RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 TPT1P8Q9HAU6 139 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 CCDC167Q9P0B6 97 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 SLAMF8Q9P0V8 285 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
CTSB-225ENST00000532409 GPC6Q9Y625 555 aaPredicted RBP13.9□□□□□ -0.18
CTSB-225ENST00000532409 AKAP9Q99996 3911 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 ABCA4P78363 2273 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 A0A1W2PNR3 127 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 A8MXE2 369 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 DNAJA2O60884 412 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 KRT75O95678 551 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 GUSBP08236 651 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 NUDT7P0C024 238 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 NR2F1P10589 423 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 HOXB9P17482 250 aaPredicted RBP13.89□□□□□ -0.19
CTSB-225ENST00000532409 KLK2P20151 261 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 CAPN3P20807 821 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 CRATP43155 626 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 MRPL19P49406 292 aaKnown RBP13.89□□□□□ -0.19
CTSB-225ENST00000532409 SESN3P58005 492 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 KCNJ10P78508 379 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 RPS26P11Q5JNZ5 115 aaPredicted RBP13.89□□□□□ -0.19
CTSB-225ENST00000532409 OR2A2Q6IF42 318 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 BLOC1S3Q6QNY0 202 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 ZNF474Q6S9Z5 364 aaPredicted RBP13.89□□□□□ -0.19
CTSB-225ENST00000532409 MSANTD1Q6ZTZ1 278 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 ESPNLQ6ZVH7 1005 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 MSRB3Q8IXL7 192 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 ROBO4Q8WZ75 1007 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 MRGPRX4Q96LA9 322 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 PRRG4Q9BZD6 226 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 PIGMQ9H3S5 423 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 COQ10BQ9H8M1 238 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 NPHS2Q9NP85 383 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 SLC52A3Q9NQ40 469 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 POLE3Q9NRF9 147 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 SLC25A37Q9NYZ2 338 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 LIPT1Q9Y234 373 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 PCDHB14Q9Y5E9 798 aa13.89□□□□□ -0.19
CTSB-225ENST00000532409 TUBAL3A6NHL2 446 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 AGAP5A6NIR3 686 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 AP3D1O14617 1153 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 EDF1O60869 148 aaKnown RBP13.88□□□□□ -0.19
CTSB-225ENST00000532409 CGAP01215 116 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 CRHP06850 196 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 ELK4P28324 431 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 ADH6P28332 368 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 FAM27E3Q08E93 113 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 MERTKQ12866 999 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 SF3A3Q12874 501 aaKnown RBP eCLIP13.88□□□□□ -0.195e-7■■■■■ 28.4
CTSB-225ENST00000532409 AGKQ53H12 422 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 SLC25A53Q5H9E4 307 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 PAGE3Q5JUK9 113 aa13.88□□□□□ -0.19
CTSB-225ENST00000532409 AP1ARQ63HQ0 302 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms