RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 SEC14L5O43304 696 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 HNRNPCL1O60812 293 aaKnown RBP17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 CCDC22O60826 627 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 HNRNPCL4P0DMR1 293 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 DRD4P21917 467 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 ELK4P28324 431 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 CEACAM8P31997 349 aaPredicted RBP17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 CLDN15P56746 228 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 CLDN20P56880 219 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 EEFSECP57772 596 aaKnown RBP17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 RAC1P63000 192 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 QPRTQ15274 297 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 TRMT5Q32P41 509 aaKnown RBP17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 SLC25A53Q5H9E4 307 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 MRPL2Q5T653 305 aaKnown RBP17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 GGNQ86UU5 652 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 METTL25Q8N6Q8 603 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 TNIP2Q8NFZ5 429 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 OR52P1PQ8NH57 321 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 FBXO27Q8NI29 283 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 BBS10Q8TAM1 723 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 ZNF524Q96C55 264 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 MRGPRX4Q96LA9 322 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 TMEM38AQ9H6F2 299 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 BCL2L10Q9HD36 194 aa17.14■□□□□ 0.33
PACSIN3-208ENST00000531226 HSPB2A8KAH6 182 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 C5orf58C9J3I9 102 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 PRSS44E7EML9 344 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 H0YC42 278 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 ETV2O00321 342 aaPredicted RBP17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 NTN1O95631 604 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 IL2RAP01589 272 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 THBS1P07996 1170 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 PGCP20142 388 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 TPD52P55327 224 aaPredicted RBP17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 HSPB2Q16082 182 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 MMEL1Q495T6 779 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 LIN52Q52LA3 116 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 REP15Q6BDI9 236 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 ZNF836Q6ZNA1 936 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 CHMP1BQ7LBR1 199 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 VRK2Q86Y07 508 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 NAXEQ8NCW5 288 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 LILRB4Q8NHJ6 448 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 ST8SIA1Q92185 356 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 CNOT9Q92600 299 aaKnown RBP17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 DNAJB12Q9NXW2 375 aaKnown RBP17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 ARMCX1Q9P291 453 aa17.13■□□□□ 0.33
PACSIN3-208ENST00000531226 MRASO14807 208 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 SNX3O60493 162 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 PGM3O95394 542 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 IL11P20809 199 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 ME2P23368 584 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 HTR1EP28566 365 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 SLC6A8P48029 635 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 MTPNP58546 118 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 RPS3AP61247 264 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 CDK6Q00534 326 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 SELPLGQ14242 412 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 CAPRIN1Q14444 709 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 CPLX4Q7Z7G2 160 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 GRAMD2AQ8IUY3 354 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 C9orf106Q8NAJ2 232 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 NFKBIDQ8NI38 313 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 WNT2BQ93097 391 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 TM9SF2Q99805 663 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 TRIM8Q9BZR9 551 aa17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 CACYBPQ9HB71 228 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 ZNF443Q9Y2A4 671 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-208ENST00000531226 UTP20O75691 2785 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 LOC100653049A0A140TA62 436 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 FAM90A27PA6NNH2 459 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 FXYD1O00168 92 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 EIF1AYO14602 144 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 KRT34O76011 436 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 NPPAP01160 153 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 ETS2P15036 469 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 DLX5P56178 289 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 SESN3P58005 492 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 EEF1A1P68104 462 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 SELENBP1Q13228 472 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 CYLC2Q14093 348 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 SCARB2Q14108 478 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 LARS2Q15031 903 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 ADRM1Q16186 407 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 CTU2Q2VPK5 515 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 RNF220Q5VTB9 566 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 REEP3Q6NUK4 255 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 PLXDC2Q6UX71 529 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 ZNF563Q8TA94 476 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 LRRC58Q96CX6 371 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 ADGRG7Q96K78 797 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 ZFP3Q96NJ6 502 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 CCDC106Q9BWC9 280 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 PINK1Q9BXM7 581 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 TMEM185BQ9H7F4 350 aa17.11■□□□□ 0.33
PACSIN3-208ENST00000531226 IFT52Q9Y366 437 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms