RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CLCF1Q9UBD9 225 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CACNA1CQ13936 2221 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 DOCK7Q96N67 2140 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 SETXQ7Z333 2677 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 EVPLLA8MZ36 301 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 ETV2O00321 342 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 FBP2O00757 339 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 SEC14L5O43304 696 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 EFNA2O43921 213 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 RCBTB2O95199 551 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 NTN1O95631 604 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 NID1P14543 1247 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PRKCAP17252 672 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PGCP20142 388 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 IL11P20809 199 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 ELK4P28324 431 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 CCR4P51679 360 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 SEC24CP53992 1094 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PLAURQ03405 335 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 QPRTQ15274 297 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PRAMEF8Q5VWM4 474 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PRAMEF7Q5VXH5 474 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 POMZP3Q6PJE2 187 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 PLXDC2Q6UX71 529 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 METTL25Q8N6Q8 603 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 WDR60Q8WVS4 1066 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 CNOT9Q92600 299 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 MAL2Q969L2 176 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 MRGPRX4Q96LA9 322 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 ANKRD27Q96NW4 1050 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 CGREF1Q99674 301 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 TM9SF2Q99805 663 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 BCL2L10Q9HD36 194 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 KCNJ16Q9NPI9 418 aa11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF629Q9UEG4 869 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-216ENST00000529856 A0A0J9YW62 118 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 NKX2-6A6NCS4 301 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 FAM90A27PA6NNH2 459 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 C19orf84I3L1E1 186 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 EIF1AYO14602 144 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ADAMDEC1O15204 470 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 TGM6O95932 706 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 OPN1LWP04000 364 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ARAFP10398 606 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ME2P23368 584 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 CTSSP25774 331 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC6A8P48029 635 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF136P52737 540 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 GYS2P54840 703 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 DLX5P56178 289 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 SESN3P58005 492 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 RPS3AP61247 264 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 TFF3Q07654 80 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 NFYCQ13952 458 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ADRM1Q16186 407 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 CTU2Q2VPK5 515 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC25A35Q3KQZ1 300 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 COQ5Q5HYK3 327 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 RPS26P11Q5JNZ5 115 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 GCNT6Q5T4J0 391 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 VRK2Q86Y07 508 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 MED12LQ86YW9 2145 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 GRAMD2AQ8IUY3 354 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 LILRA2Q8N149 483 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 OR52P1PQ8NH57 321 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 TMEM234Q8WY98 164 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ST8SIA1Q92185 356 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ADGRG7Q96K78 797 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ZFP3Q96NJ6 502 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ELAC2Q9BQ52 826 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 TMEM38AQ9H6F2 299 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ACER3Q9NUN7 267 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 DNAJB12Q9NXW2 375 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF232Q9UNY5 417 aa11.4□□□□□ -0.58
CCDC90B-216ENST00000529856 HCFC1P51610 2035 aa11.4□□□□□ -0.59
CCDC90B-216ENST00000529856 LOC100653049A0A140TA62 436 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 CDHR4A6H8M9 788 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 GMNCA6NCL1 334 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC22A20A6NK97 555 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 BBIP1A8MTZ0 92 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 C5orf58C9J3I9 102 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 DVL2O14641 736 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC22A2O15244 555 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 CCDC22O60826 627 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ADAM11O75078 769 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 KRT34O76011 436 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 PGM3O95394 542 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 IL18BPO95998 194 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 THBS1P07996 1170 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 TMIGD3P0DMS9 266 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 ETS2P15036 469 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 LSP1P33241 339 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 RYKP34925 604 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 EIF1AXP47813 144 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 EEF1A1P68104 462 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 CDK6Q00534 326 aa11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 LARS2Q15031 903 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-216ENST00000529856 MAPRE2Q15555 327 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms