RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RIT2Q99578 217 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ELOVL4Q9GZR5 314 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 VCX2Q9H322 139 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PNO1Q9NRX1 252 aaKnown RBP3.47□□□□□ -1.85
C11orf88-204ENST00000529661 LCMT1Q9UIC8 334 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 RPH3ALQ9UNE2 315 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 CHTOPQ9Y3Y2 248 aaKnown RBP3.47□□□□□ -1.85
C11orf88-204ENST00000529661 OARD1Q9Y530 152 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 USP16Q9Y5T5 823 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 SLCO1B1Q9Y6L6 691 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ANKRD30BQ9BXX2 1392 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PRRG1O14668 218 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CACNG3O60359 315 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 NEMFO60524 1076 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CD55P08174 381 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF44P15621 663 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 IGHV1-2P23083 117 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 LIM2P55344 173 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 ATP5IP56385 69 aaPredicted RBP3.46□□□□□ -1.86
C11orf88-204ENST00000529661 RAB40BQ12829 278 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 C15orf32Q32M92 178 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 TMEM225Q6GV28 225 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 Q6ZR54 194 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 MARCH9Q86YJ5 346 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 NAXDQ8IW45 347 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CCDC148Q8NFR7 591 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 OR2T33Q8NG76 320 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 ZPLD1Q8TCW7 415 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 PIGCQ92535 297 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 PELI1Q96FA3 418 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 SLC41A3Q96GZ6 507 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 TCEANC2Q96MN5 208 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 TGM7Q96PF1 710 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 GSDMAQ96QA5 445 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CCT8L2Q96SF2 557 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 DPH7Q9BTV6 452 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CAPS2Q9BXY5 557 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 CLSTN2Q9H4D0 955 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 IKZF5Q9H5V7 419 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 APMAPQ9HDC9 416 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 RAB20Q9NX57 234 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 PIPOXQ9P0Z9 390 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 SLC2A6Q9UGQ3 507 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 PIK3R4Q99570 1358 aa3.46□□□□□ -1.86
C11orf88-204ENST00000529661 MROH5Q6ZUA9 1318 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 WDR19Q8NEZ3 1342 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 METTL21EPA6NDL7 271 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 FRG2CA6NGY1 282 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 FAM47DPA6NHR8 397 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 H3BMQ9 156 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 K7ENP7 123 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 CDX4O14627 284 aaPredicted RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 TPST2O60704 377 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF354AO60765 605 aaPredicted RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 ECI2O75521 394 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 CABYRO75952 493 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 CA1P00915 261 aaPredicted RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 HPCAL1P37235 193 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 MAGEA9P43362 315 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 XCR1P46094 333 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 FNTAP49354 379 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 AIF1P55008 147 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 ACTR3P61158 418 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 MRPS11P82912 194 aaKnown RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 OTUD4Q01804 1114 aaKnown RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 MAP2K1Q02750 393 aaPredicted RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 PDK3Q15120 406 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 Q1RN00 199 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 EIPR1Q53HC9 387 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 C10orf120Q5SQS8 335 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 ATF7IP2Q5U623 682 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 SLC22A10Q63ZE4 541 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 WSCD1Q658N2 575 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 OLFML2AQ68BL7 652 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 UFSP1Q6NVU6 142 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 SERINC5Q86VE9 423 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 SLC22A9Q8IVM8 553 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 VSTM4Q8IW00 320 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 OR52K1Q8NGK4 314 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 OR4D5Q8NGN0 318 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 CCDC26Q8TAB7 109 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 AGR3Q8TD06 166 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 ANKRD49Q8WVL7 239 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 TRUB1Q8WWH5 349 aaKnown RBP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 FBXO32Q969P5 355 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 NT5C3BQ969T7 300 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 COQ2Q96H96 371 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 OR5B2Q96R09 309 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 TUBGCP2Q9BSJ2 902 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 GLIPR2Q9H4G4 154 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 DPM3Q9P2X0 92 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 SCML2Q9UQR0 700 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 TMEM94Q12767 1356 aa3.45□□□□□ -1.86
C11orf88-204ENST00000529661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.45□□□□□ -1.86
C11orf88-204ENST00000529661 TTC41PQ6P2S7 1318 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 CLSPNQ9HAW4 1339 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 TRAV26-1A0A087WT03 109 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 ARPC4-TTLL3A0A0A6YYG9 625 aa3.44□□□□□ -1.86
C11orf88-204ENST00000529661 IGHV3-35A0A0C4DH35 117 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms