RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 TNFSF11O14788 317 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 SMNDC1O75940 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
COPB1-206ENST00000529210 SYNGR4O95473 234 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 IL6P05231 212 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 OR12D1P0DN82 309 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 POU2F1P14859 743 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 IDO1P14902 403 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 CRYGSP22914 178 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 CPOXP36551 454 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 PGM1P36871 562 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 MRPL19P49406 292 aaKnown RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 KHKP50053 298 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 ART1P52961 327 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 CARD18P57730 90 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 UFM1P61960 85 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 RNPS1Q15287 305 aaKnown RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 TOMM34Q15785 309 aaPredicted RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 GSTA3Q16772 222 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 MSANTD1Q6ZTZ1 278 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 EIF3MQ7L2H7 374 aaKnown RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 C16orf62Q7Z3J2 963 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 CLEC4FQ8N1N0 589 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 ZNF610Q8N9Z0 462 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 OSTF1Q92882 214 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 ZNF524Q96C55 264 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 ROPN1LQ96C74 230 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 MARK4Q96L34 752 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 SLC35A5Q9BS91 424 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 PRRG4Q9BZD6 226 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 LIME1Q9H400 295 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 COQ10BQ9H8M1 238 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 EXOSC3Q9NQT5 275 aaKnown RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 SDR39U1Q9NRG7 319 aaPredicted RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 ZIM2Q9NZV7 527 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 MARCOQ9UEW3 520 aaPredicted RBP10.78□□□□□ -0.68
COPB1-206ENST00000529210 MKLN1Q9UL63 735 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 WDR45Q9Y484 360 aa10.78□□□□□ -0.68
COPB1-206ENST00000529210 CENPVL1A0A0U1RR11 272 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 CCDC154A6NI56 674 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 DEFB108AA8MXU0 73 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 C16orf97H3BN30 126 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 HMGN4O00479 90 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 CPSF4O95639 269 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 CSTAP01040 98 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZCCHC18P0CG32 403 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 PPP3CBP16298 524 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 RPS4Y1P22090 263 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 DNASE1P24855 282 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 FKBP2P26885 142 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 SHC1P29353 583 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 AGTR1P30556 359 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ANXA11P50995 505 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 RAC3P60763 192 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 SIRPAP78324 504 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 QPRTQ15274 297 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 GPR68Q15743 365 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 MAPK14Q16539 360 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 C3orf33Q6P1S2 294 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 TNFAIP8L2Q6P589 184 aaPredicted RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 MAVSQ7Z434 540 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 CMIPQ8IY22 773 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZNF619Q8N2I2 560 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 SLC43A2Q8N370 569 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZNF614Q8N883 585 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZFP90Q8TF47 636 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 XAGE5Q8WWM1 108 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 TMEM234Q8WY98 164 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZNF75CPQ92670 426 aaPredicted RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 ARL8AQ96BM9 186 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 WFIKKN1Q96NZ8 548 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 TRNT1Q96Q11 434 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 PANX1Q96RD7 426 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 TACO1Q9BSH4 297 aaKnown RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 WDR55Q9H6Y2 383 aaPredicted RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 FANCFQ9NPI8 374 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 CCM2LQ9NUG4 571 aaPredicted RBP10.77□□□□□ -0.69
COPB1-206ENST00000529210 ACER3Q9NUN7 267 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 ZNF226Q9NYT6 803 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.69
COPB1-206ENST00000529210 MAP1AP78559 2803 aaPredicted RBP10.76□□□□□ -0.69
COPB1-206ENST00000529210 FAAHO00519 579 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 CASKO14936 926 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 SIAH2O43255 324 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 SLC22A3O75751 556 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 ATE1O95260 518 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 TGDSO95455 350 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 NUDT14O95848 222 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 PLGP00747 810 aaPredicted RBP10.76□□□□□ -0.69
COPB1-206ENST00000529210 RAF1P04049 648 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 PGCP20142 388 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
COPB1-206ENST00000529210 SFTPDP35247 375 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 CHI3L1P36222 383 aaPredicted RBP10.76□□□□□ -0.69
COPB1-206ENST00000529210 CTBP2P56545 445 aa10.76□□□□□ -0.69
COPB1-206ENST00000529210 PLAURQ03405 335 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms