RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 CLIP4Q8N3C7 705 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 ANKRD9Q96BM1 317 aaPredicted RBP10.87□□□□□ -0.67
USF1-208ENST00000528768 COX4I2Q96KJ9 171 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 LRR1Q96L50 414 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 ZNF582Q96NG8 517 aaPredicted RBP10.87□□□□□ -0.67
USF1-208ENST00000528768 DACH2Q96NX9 599 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 LMF2Q9BU23 707 aaKnown RBP10.87□□□□□ -0.67
USF1-208ENST00000528768 G6PC3Q9BUM1 346 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 PDE7BQ9NP56 450 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 ISYNA1Q9NPH2 558 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 CTPS2Q9NRF8 586 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 PRTFDC1Q9NRG1 225 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 MRPS18AQ9NVS2 196 aaKnown RBP10.87□□□□□ -0.67
USF1-208ENST00000528768 ETAA1Q9NY74 926 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 CRNNQ9UBG3 495 aaPredicted RBP10.87□□□□□ -0.67
USF1-208ENST00000528768 SSR3Q9UNL2 185 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 PCDHGA3Q9Y5H0 932 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 PEX16Q9Y5Y5 336 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 CDH10Q9Y6N8 788 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 LRP4O75096 1905 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 NBASA2RRP1 2371 aa10.87□□□□□ -0.67
USF1-208ENST00000528768 MDC1Q14676 2089 aaKnown RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 UTP20O75691 2785 aaKnown RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 LOC100506127A0A0U1RQW1 187 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 A0A1B0GVG6 124 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 TLCD2A6NGC4 264 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 UNC119BA6NIH7 251 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 AQP9O43315 295 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 PRAMEF2O60811 474 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 RCBTB2O95199 551 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 TP53P04637 393 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 CELA2BP08218 269 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 BMP7P18075 431 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 CD82P27701 267 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 GALNSP34059 522 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 ARL4DP49703 201 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 MAZP56270 477 aaKnown RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 MLLT11Q13015 90 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 ITGADQ13349 1161 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 GRM7Q14831 915 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 INAQ16352 499 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 MINDY4Q4G0A6 757 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 FLYWCH1Q4VC44 716 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 SYT14P1Q58G82 188 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 GUSBP11Q6P575 273 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 ZNF613Q6PF04 617 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 Q6ZNX1 250 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 ZNF550Q7Z398 422 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 HMGN2P46Q86SG4 172 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 COMTD1Q86VU5 262 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 CMIPQ8IY22 773 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 NANOGP1Q8N7R0 232 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 OR2T33Q8NG76 320 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 OR52R1Q8NGF1 315 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 OR5T3Q8NGG3 340 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 OR9A4Q8NGU2 314 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 B4GALNT2Q8NHY0 566 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 OIT3Q8WWZ8 545 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 RIT1Q92963 219 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 CTHRC1Q96CG8 243 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 FAM46AQ96IP4 442 aaKnown RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 WFDC6Q9BQY6 131 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 RSPO3Q9BXY4 272 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 TRIM2Q9C040 744 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 RAB33BQ9H082 229 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 ANKRA2Q9H9E1 313 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 Q9N2J8 555 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 FGF20Q9NP95 211 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 SOHLH2Q9NX45 425 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 PRODH2Q9UF12 536 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 SLC7A7Q9UM01 511 aa10.86□□□□□ -0.67
USF1-208ENST00000528768 GPR55Q9Y2T6 319 aaPredicted RBP10.86□□□□□ -0.67
USF1-208ENST00000528768 A0A0A6YYC8 382 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 CDHR4A6H8M9 788 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 KDM4EB2RXH2 506 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 LMO7DNF2Z398 122 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 H0YIG0 161 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 I3L1I5 382 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 ZNF749O43361 778 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 FRS3O43559 492 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 PRKYO43930 277 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 IGFBP1P08833 259 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 TSPAN19P0C672 248 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 OCM2P0CE71 109 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 OCMP0CE72 109 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 FUT4P22083 530 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 CD40LGP29965 261 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 GRK5P34947 590 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 TRHRP34981 398 aaPredicted RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 HSD17B7P56937 341 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 ZNF45Q02386 682 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 KRR1Q13601 381 aaKnown RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 OR1Q1Q15612 314 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 PGGHGQ32M88 737 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
USF1-208ENST00000528768 MRPL2Q5T653 305 aaKnown RBP10.85□□□□□ -0.67
USF1-208ENST00000528768 ACSM5Q6NUN0 579 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms