RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SGCBQ16585 318 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 PLPPR5Q32ZL2 321 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 CCNJQ5T5M9 372 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ADAM5Q6NVV9 412 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ESPNLQ6ZVH7 1005 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 FAM214BQ7L5A3 538 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 WFDC8Q8IUA0 241 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 KRTCAP2Q8N6L1 136 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ZNF781Q8N8C0 355 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 B4GALNT2Q8NHY0 566 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 FBXO30Q8TB52 745 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 FNDC9Q8TBE3 224 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 JADE3Q92613 823 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 CDS1Q92903 461 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 ADGRG7Q96K78 797 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 C20orf27Q9GZN8 174 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 SHARPINQ9H0F6 387 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 AKTIPQ9H8T0 292 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 PLSCR4Q9NRQ2 329 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 GLRX2Q9NS18 164 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 MED17Q9NVC6 651 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.39□□□□□ -0.917e-6■□□□□ 9.2
CPSF1-203ENST00000527916 LIPT1Q9Y234 373 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 VDAC3Q9Y277 283 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 V9GYY5 206 aaPredicted RBP9.39□□□□□ -0.91
CPSF1-203ENST00000527916 CADP27708 2225 aa9.39□□□□□ -0.91
CPSF1-203ENST00000527916 A0A1W2PP18 115 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 WDR91A4D1P6 747 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CFLARO15519 480 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 AK1P00568 194 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GUSBP08236 651 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 LINGO3P0C6S8 592 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CDKN1AP38936 164 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 P2RX1P51575 399 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 STX3Q13277 289 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 TP53BP2Q13625 1128 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 MPP2Q14168 576 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CD226Q15762 336 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CTU2Q2VPK5 515 aaKnown RBP9.38□□□□□ -0.91
CPSF1-203ENST00000527916 SPDYE7PQ495Y7 208 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CEP85LQ5SZL2 805 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 DCST2Q5T1A1 773 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 DNM1P46Q6ZS02 220 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GALNT10Q86SR1 603 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GATSQ8NAP1 163 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 VPS37AQ8NEZ2 397 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 OR10D3Q8NH80 312 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 POC1BQ8TC44 478 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 MIPOL1Q8TD10 442 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 SMAP2Q8WU79 429 aaPredicted RBP9.38□□□□□ -0.91
CPSF1-203ENST00000527916 OIT3Q8WWZ8 545 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 ROBO4Q8WZ75 1007 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 TESCQ96BS2 214 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 CHMP6Q96FZ7 201 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 GMPPAQ96IJ6 420 aaPredicted RBP9.38□□□□□ -0.91
CPSF1-203ENST00000527916 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 OR7D2Q96RA2 312 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 SDF2Q99470 211 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 SORT1Q99523 831 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 TACO1Q9BSH4 297 aaKnown RBP9.38□□□□□ -0.91
CPSF1-203ENST00000527916 NMUR2Q9GZQ4 415 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 ALG2Q9H553 416 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 MCTS1Q9ULC4 181 aaKnown RBP9.38□□□□□ -0.91
CPSF1-203ENST00000527916 ICAM5Q9UMF0 924 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 PCDHGB4Q9UN71 923 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 EMC9Q9Y3B6 208 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 DTNAQ9Y4J8 743 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 RNF115Q9Y4L5 304 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 KCNE3Q9Y6H6 103 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
CPSF1-203ENST00000527916 PRSS51A0A1B0GVH4 220 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SHISA8B8ZZ34 492 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 ETV2O00321 342 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 EIF1AYO14602 144 aaKnown RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 CLOCKO15516 846 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 GMFGO60234 142 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 EIF4E2O60573 245 aaKnown RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 DNAJA2O60884 412 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SCN2BO60939 215 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 AQP8O94778 261 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 AGR2O95994 175 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 PLGP00747 810 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SOD3P08294 240 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SRD5A1P18405 259 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 LBPP18428 481 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 MATN1P21941 496 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 ME2P23368 584 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 ELK4P28324 431 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 EIF1AXP47813 144 aaKnown RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 SLC18A1P54219 525 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 CASP9P55211 416 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 PDCD2Q16342 344 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-203ENST00000527916 DPY19L1Q2PZI1 675 aa9.37□□□□□ -0.91
CPSF1-203ENST00000527916 TMEM249Q2WGJ8 235 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms