RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ZNF583Q96ND8 569 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 COL21A1Q96P44 957 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CCL19Q99731 98 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 ZNF350Q9GZX5 532 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SLC38A1Q9H2H9 487 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 HPF1Q9NWY4 346 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 CHST2Q9Y4C5 530 aa9.87□□□□□ -0.83
NEDD8-204ENST00000526430 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 NPIPA5A0A0B4J1W7 369 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 LRRC3CA6NJW4 275 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 DUXAA6NLW8 204 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 NPIPA7E9PJI5 369 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 AIM2O14862 343 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 HCN1O60741 890 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 TRIM3O75382 744 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-204ENST00000526430 SOX30O94993 753 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 UTS2O95399 124 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 RFPL3SP0C7P2 107 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 NPIPA8P0DM63 369 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 PAX1P15863 534 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 MAGEA8P43361 318 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 CPA2P48052 419 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 DNASE1L1P49184 302 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 NRG3P56975 720 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 CBX1P83916 185 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 CHRNEQ04844 493 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 MAPRE2Q15555 327 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 ZNHIT3Q15649 155 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-204ENST00000526430 DECR1Q16698 335 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 HYAL4Q2M3T9 481 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 CHRFAM7AQ494W8 412 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 KLHL26Q53HC5 615 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 PRAMEF20Q5VT98 475 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 HACD2Q6Y1H2 254 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 DND1Q8IYX4 353 aaKnown RBP9.86□□□□□ -0.83
NEDD8-204ENST00000526430 FBXW8Q8N3Y1 598 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 COX18Q8N8Q8 333 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 WDSUB1Q8N9V3 476 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 JADE3Q92613 823 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 MAL2Q969L2 176 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 ROPN1LQ96C74 230 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 EFCAB1Q9HAE3 211 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 GALNT9Q9HCQ5 603 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 TUBA8Q9NY65 449 aaPredicted RBP9.86□□□□□ -0.83
NEDD8-204ENST00000526430 TAGLN3Q9UI15 199 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 MKLN1Q9UL63 735 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 OR10H1Q9Y4A9 318 aa9.86□□□□□ -0.83
NEDD8-204ENST00000526430 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 MGAM2Q2M2H8 2515 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TMEM229AB2RXF0 380 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 NME4O00746 187 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 OIP5O43482 229 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 BCAS1O75363 584 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 UGT2B17O75795 530 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 H6PDO95479 791 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 OXSR1O95747 527 aaPredicted RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 NGFRP08138 427 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 KRT16P08779 473 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 FAM157CP0CG43 387 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TBXA2RP21731 343 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 RPS4Y1P22090 263 aaKnown RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TIMP3P35625 211 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 CRATP43155 626 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 MAGEA5P43359 124 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 PTH2RP49190 550 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 KHKP50053 298 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 CRYBA2P53672 197 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 DSTNP60981 165 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 PSPHP78330 225 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 FADDQ13158 208 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 ZNF141Q15928 474 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 C20orf204Q6ZNR8 217 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 LRRC74BQ6ZQY2 392 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TRPM8Q7Z2W7 1104 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 MTERF4Q7Z6M4 381 aaKnown RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 HMGN2P46Q86SG4 172 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 MARCH3Q86UD3 253 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 ULK2Q8IYT8 1036 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TMEM251Q8N6I4 163 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 FAM13CQ8NE31 585 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 OR8J3Q8NGG0 315 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 CMTM5Q96DZ9 223 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 NSL1Q96IY1 281 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 C19orf24Q9BVV8 132 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 AMBRA1Q9C0C7 1298 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 QRSL1Q9H0R6 528 aaKnown RBP9.85□□□□□ -0.83
NEDD8-204ENST00000526430 TMEM38AQ9H6F2 299 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 A4GALTQ9NPC4 353 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 SACM1LQ9NTJ5 587 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 CNIH4Q9P003 139 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 JKAMPQ9P055 326 aa9.85□□□□□ -0.83
NEDD8-204ENST00000526430 MED12Q93074 2177 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 SH3D21A4FU49 640 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 CCT8L1PA6NM43 557 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 ALG1L2C9J202 215 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 TP53I11O14683 189 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 ADAM11O75078 769 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 UBOX5O94941 541 aa9.84□□□□□ -0.83
NEDD8-204ENST00000526430 EPPINO95925 133 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms