RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 PRAMEF7Q5VXH5 474 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 B3GNT6Q6ZMB0 384 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ZNF836Q6ZNA1 936 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 MRGPRGQ86SM5 289 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CMIPQ8IY22 773 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PM20D2Q8IYS1 436 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 UBQLNLQ8IYU4 475 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 EID3Q8N140 333 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 TOR1AIP2Q8NFQ8 470 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 FBXO27Q8NI29 283 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 BBS10Q8TAM1 723 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 PHF10Q8WUB8 498 aaKnown RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 TUBA1CQ9BQE3 449 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 RLIMQ9NVW2 624 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ADAM21Q9UKJ8 722 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 ZNF443Q9Y2A4 671 aaPredicted RBP11.12□□□□□ -0.63
CTTN-210ENST00000525852 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CHST2Q9Y4C5 530 aa11.12□□□□□ -0.63
CTTN-210ENST00000525852 CENPEQ02224 2701 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 H0Y3Z8 333 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 LINC01387J3KSC0 135 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 EFNA2O43921 213 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 NTN1O95631 604 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 OPN1LWP04000 364 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 HOXD4P09016 255 aaPredicted RBP11.11□□□□□ -0.63
CTTN-210ENST00000525852 PEPDP12955 493 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 PRKCAP17252 672 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 RYKP34925 604 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 PTGER4P35408 488 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 EEF1A1P68104 462 aaKnown RBP11.11□□□□□ -0.63
CTTN-210ENST00000525852 BCL2A1Q16548 175 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 CYP51A1Q16850 503 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 HIST2H2BCQ6DN03 193 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 TMEM211Q6ICI0 200 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 REEP3Q6NUK4 255 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 NET1Q7Z628 596 aaPredicted RBP11.11□□□□□ -0.63
CTTN-210ENST00000525852 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
CTTN-210ENST00000525852 ZZZ3Q8IYH5 903 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 CLIP4Q8N3C7 705 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 METTL25Q8N6Q8 603 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 PCYOX1LQ8NBM8 494 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 OR10A6Q8NH74 314 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 ZPLD1Q8TCW7 415 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 SMPDL3BQ92485 455 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 PIF1Q9H611 641 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
CTTN-210ENST00000525852 AP4B1Q9Y6B7 739 aa11.11□□□□□ -0.63
CTTN-210ENST00000525852 CRYBG3Q68DQ2 2970 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 CDHR4A6H8M9 788 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 ETV2O00321 342 aaPredicted RBP11.1□□□□□ -0.63
CTTN-210ENST00000525852 AP3D1O14617 1153 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 AIM2O14862 343 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 SEC14L5O43304 696 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 TOXO94900 526 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 EPPINO95925 133 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 THBS1P07996 1170 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 ETS2P15036 469 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 PGCP20142 388 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 SLC6A2P23975 617 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 AQP1P29972 269 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
CTTN-210ENST00000525852 LARS2Q15031 903 aaKnown RBP11.1□□□□□ -0.63
CTTN-210ENST00000525852 SLC25A53Q5H9E4 307 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 NSUN5P2Q63ZY6 315 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 ADGRE4PQ86SQ3 457 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 GGNQ86UU5 652 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 CALHM3Q86XJ0 350 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 C11orf65Q8NCR3 313 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 RND1Q92730 232 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 TRIB1Q96RU8 372 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 TMEM185BQ9H7F4 350 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 USP22Q9UPT9 525 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 IFT52Q9Y366 437 aa11.1□□□□□ -0.63
CTTN-210ENST00000525852 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
CTTN-210ENST00000525852 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 CLCA1A8K7I4 914 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 GCM2O75603 506 aaPredicted RBP11.09□□□□□ -0.63
CTTN-210ENST00000525852 FAM107AO95990 144 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
CTTN-210ENST00000525852 GKN3PP0CG01 181 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 SHC1P29353 583 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 SMSP52788 366 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 SESN3P58005 492 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 ZNF311Q5JNZ3 666 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 ZNF808Q8N4W9 903 aaPredicted RBP11.09□□□□□ -0.63
CTTN-210ENST00000525852 MEIOBQ8N635 442 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 ANKS4BQ8N8V4 417 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 NAXEQ8NCW5 288 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 HIPK4Q8NE63 616 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 TNIP2Q8NFZ5 429 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 OR10Q1Q8NGQ4 319 aa11.09□□□□□ -0.63
CTTN-210ENST00000525852 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms