RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 CHRNEQ04844 493 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 MAPK14Q16539 360 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 COX20Q5RI15 118 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 C6orf10Q5SRN2 563 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 PINK1Q9BXM7 581 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 ZNF385DQ9H6B1 395 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 CCDC134Q9H6E4 229 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 GLRX2Q9NS18 164 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 CCDC167Q9P0B6 97 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 PCDHB14Q9Y5E9 798 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 PDZD2O15018 2839 aa18.78■□□□□ 0.6
TRAPPC9-215ENST00000524162 CENPVL1A0A0U1RR11 272 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 A0A1W2PP18 115 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 SEC14L5O43304 696 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 GMFGO60234 142 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 TNFSF13O75888 250 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 C1QCP02747 245 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 TFPTP0C1Z6 253 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 NR2F1P10589 423 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 PRF1P14222 555 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 FKBP2P26885 142 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 SLC6A8P48029 635 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 CRISP3P54108 245 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 FOXF2Q12947 444 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 SELENBP1Q13228 472 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 GUSBP1Q15486 140 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 SYPL1Q16563 259 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 P4HA3Q7Z4N8 544 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 KIF18BQ86Y91 864 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 LILRA2Q8N149 483 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 ANKFN1Q8N957 763 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 OR2V1Q8NHB1 315 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 INTS12Q96CB8 462 aaKnown RBP18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 ZG16BQ96DA0 208 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 KLHL15Q96M94 604 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 NPAS1Q99742 590 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 KLHDC3Q9BQ90 382 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 PACSIN3Q9UKS6 424 aa18.77■□□□□ 0.6
TRAPPC9-215ENST00000524162 A0A1W2PNV4 684 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 SHISA8B8ZZ34 492 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 H0YC42 278 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 CLIC1O00299 241 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 FAAHO00519 579 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 EIF1AYO14602 144 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 MSTNO14793 375 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 DBIP07108 87 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 CHRM4P08173 479 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 NID1P14543 1247 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 TPD52P55327 224 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 DSTNP60981 165 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 FOXF1Q12946 379 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 PON3Q15166 354 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 QPRTQ15274 297 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 RGNQ15493 299 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 MAPK11Q15759 364 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 SGCBQ16585 318 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 DNAJC14Q6Y2X3 702 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 OR10D3Q8NH80 312 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 FBXO27Q8NI29 283 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 FNDC9Q8TBE3 224 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 FIG4Q92562 907 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 THUMPD3Q9BV44 507 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 GP6Q9HCN6 339 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 NPHS2Q9NP85 383 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 TIGARQ9NQ88 270 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 ACER3Q9NUN7 267 aa18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 MCTS1Q9ULC4 181 aaKnown RBP18.76■□□□□ 0.59
TRAPPC9-215ENST00000524162 TRBV5-3A0A0A0MS03 114 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 TMEM247A6NEH6 219 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 EFNA2O43921 213 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 PABPC4LP0CB38 370 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 CAPN3P20807 821 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 CRATP43155 626 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 EIF1AXP47813 144 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 MAP2K6P52564 334 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 TOMM34Q15785 309 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 AGKQ53H12 422 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC2A7Q6PXP3 512 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 PEX5LQ8IYB4 626 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 TMCO5AQ8N6Q1 288 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 PNPT1Q8TCS8 783 aaKnown RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC25A43Q8WUT9 341 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 SLC38A5Q8WUX1 472 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 CPNE4Q96A23 557 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 MCCC2Q9HCC0 563 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 BCL2L10Q9HD36 194 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 CORO2BQ9UQ03 480 aa18.75■□□□□ 0.59
TRAPPC9-215ENST00000524162 CCDC168Q8NDH2 2452 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 A0A0G2JPF8 293 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 A0A0J9YW62 118 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 A8MXE2 369 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 HNRNPCL2B2RXH8 293 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 HNRNPCL3B7ZW38 293 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 HNRNPCL1O60812 293 aaKnown RBP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 GOSR1O95249 250 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 THBS1P07996 1170 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 UBTFL6P0CB48 400 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 HNRNPCL4P0DMR1 293 aa18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 TROVE2P10155 538 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAPPC9-215ENST00000524162 CD8BP10966 210 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms