RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MED20Q9H944 212 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 TBCCD1Q9NVR7 557 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 A6NL46 340 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 MAS1P04201 325 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CAPNS1P04632 268 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 COL9A1P20849 921 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CD1CP29017 333 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CA5AP35218 305 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CD83Q01151 205 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 RELAQ04206 551 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 MFSD13AQ14CX5 517 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 GLT8D1Q68CQ7 371 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 WBP2NLQ6ICG8 309 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 ANKRD53Q8N9V6 530 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 DDIT4LQ96D03 193 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 UPB1Q9UBR1 384 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 TDRD15B5MCY1 1934 aaKnown RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 A0A1B0GWA3 101 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 OTOL1A6NHN0 477 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 EEF1E1O43324 174 aaKnown RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF749O43361 778 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CPNE6O95741 557 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 PGAM2P15259 253 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 PSMB10P40306 273 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 OPRL1P41146 370 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 GFERP55789 205 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 CBFBQ13951 182 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 EFR3AQ14156 821 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 TRAM1Q15629 374 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 MED25Q71SY5 747 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLITRK4Q8IW52 837 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 UEVLDQ8IX04 471 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 BAHD1Q8TBE0 780 aaPredicted RBP12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 DPAGT1Q9H3H5 408 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 TAS2R16Q9NYV7 291 aa12.17□□□□□ -0.46
PCDHGB1-201ENST00000523390 RBMXL2O75526 392 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 FBXO45P0C2W1 286 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 Q8N402 240 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 DNAJC22Q8N4W6 341 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 NAA11Q9BSU3 229 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 THSD1Q9NS62 852 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TRAV6A0A075B6T7 132 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 NSG1A0A0A6YYJ2 146 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 IGHV3-20A0A0C4DH32 117 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SERINC4A6NH21 518 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF878C9JN71 531 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 HMGN4O00479 90 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 HCRTR1O43613 425 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SIGLEC6O43699 453 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 DLX2Q07687 328 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 RAB40BQ12829 278 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 GARNL3Q5VVW2 1013 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TCEAL6Q6IPX3 200 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMED4Q7Z7H5 227 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC35F2Q8IXU6 374 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZFPM2Q8WW38 1151 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 THRSPQ92748 146 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PGAM5Q96HS1 289 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SACM1LQ9NTJ5 587 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 ASXL3Q9C0F0 2248 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 BLACEA4D250 179 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SYT5O00445 386 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRR35P0CG20 571 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 RPS5P46782 204 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC18B1Q6NT16 456 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 BCDIN3DQ7Z5W3 292 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TP53I13Q8NBR0 393 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC7A13Q8TCU3 470 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMEM255BQ8WV15 326 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 HRASLS5Q96KN8 279 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SLC6A13Q9NSD5 602 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SIDT1Q9NXL6 827 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 CNOT2Q9NZN8 540 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PLXNA1Q9UIW2 1896 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 LRRN3E7EW58 273 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 SMAD9O15198 467 aaKnown RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 CD97P48960 835 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 STARP49675 285 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 RGS6P49758 472 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PHC1P78364 1004 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 MESP2Q0VG99 397 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 OR7G2Q8NG99 324 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 LRRN3Q9H3W5 708 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 ZNF385DQ9H6B1 395 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 LYRM4Q9HD34 91 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 LTB4R2Q9NPC1 389 aa12.16□□□□□ -0.46
PCDHGB1-201ENST00000523390 C2orf42Q9NWW7 574 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms