RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 DENND2DQ9H6A0 471 aaPredicted RBP10.85□□□□□ -0.67
PVT1-215ENST00000522963 ARMC7Q9H6L4 198 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 EXOSC3Q9NQT5 275 aaKnown RBP10.85□□□□□ -0.67
PVT1-215ENST00000522963 KLHL28Q9NXS3 571 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 MED11Q9P086 117 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 FBXL2Q9UKC9 423 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 ICAM5Q9UMF0 924 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 SH3GLB1Q9Y371 365 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
PVT1-215ENST00000522963 FREM3P0C091 2139 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 MYO7BQ6PIF6 2116 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 AP3D1O14617 1153 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 CDC40O60508 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
PVT1-215ENST00000522963 SEMG1P04279 462 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 EDN3P14138 238 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 MSX1P28360 303 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ACAA2P42765 397 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 P2RX1P51575 399 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ACTR3P61158 418 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 EPS8Q12929 822 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 NPTX1Q15818 432 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 RNFT1Q5M7Z0 435 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 CARM1Q86X55 608 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 PLCZ1Q86YW0 608 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 RBM45Q8IUH3 476 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 OR4K17Q8NGC6 315 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 OR6T1Q8NGN1 323 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 OR1J4Q8NGS1 313 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 CANT1Q8WVQ1 401 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 GEMIN6Q8WXD5 167 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ZNF524Q96C55 264 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ZNF597Q96LX8 424 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 GNRHR2Q96P88 292 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 BARD1Q99728 777 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 SLX1AQ9BQ83 275 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 SH3BGRL2Q9UJC5 107 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 OSGIN2Q9Y236 505 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 EXPH5Q8NEV8 1989 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 GCN1Q92616 2671 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
PVT1-215ENST00000522963 HIVEP3Q5T1R4 2406 aa10.84□□□□□ -0.67
PVT1-215ENST00000522963 DHRS12A0PJE2 317 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TPST2O60704 377 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 GLSO94925 669 aaPredicted RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 RFPL3SP0C7P2 107 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 RYKP34925 604 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 CCR4P51679 360 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TDGF1P3P51864 188 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 SUMO3P55854 103 aaPredicted RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 RGS8P57771 180 aaPredicted RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 PPIAP62937 165 aaKnown RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 HSF1Q00613 529 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TOMM34Q15785 309 aaPredicted RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 ZNF550Q7Z398 422 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TSEN54Q7Z6J9 526 aaKnown RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 ZNF440Q8IYI8 595 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TOR1AIP2Q8NFQ8 470 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 GPR119Q8TDV5 335 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 SLCO4A1Q96BD0 722 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 SLC47A1Q96FL8 570 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 C7orf34Q96L11 122 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 SEPHS2Q99611 448 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 PRR14Q9BWN1 585 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 UGT2B28Q9BY64 529 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 AMBRA1Q9C0C7 1298 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 DEFB127Q9H1M4 99 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 EVA1AQ9H8M9 152 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 HHATLQ9HCP6 504 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 BOKQ9UMX3 212 aaPredicted RBP10.83□□□□□ -0.68
PVT1-215ENST00000522963 SLC9A8Q9Y2E8 581 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 POLEQ07864 2286 aa10.83□□□□□ -0.68
PVT1-215ENST00000522963 DOPEY2Q9Y3R5 2298 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 ACOT7O00154 380 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 SEMA7AO75326 666 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 CBR3O75828 277 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 AGFG2O95081 481 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 GPIP06744 558 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 LINGO3P0C6S8 592 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 UMPSP11172 480 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 ELAVL4P26378 380 aaKnown RBP10.82□□□□□ -0.68
PVT1-215ENST00000522963 HTR2AP28223 471 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 SLC6A8P48029 635 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 VLDLRP98155 873 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 CBFBQ13951 182 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 IQCCQ4KMZ1 466 aa10.82□□□□□ -0.68
PVT1-215ENST00000522963 FAM98BQ52LJ0 330 aaKnown RBP10.82□□□□□ -0.68
PVT1-215ENST00000522963 ARSKQ6UWY0 536 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms