RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 BCKDKO14874 412 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SMNDC1O75940 238 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LIFP15018 202 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MYF6P23409 242 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ITPKBP27987 946 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ELK4P28324 431 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ALDH6A1Q02252 535 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KRT80Q6KB66 452 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 POMZP3Q6PJE2 187 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF550Q7Z398 422 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF555Q8NEP9 628 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ADAMTS17Q8TE56 1095 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GATA6Q92908 595 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NPAS1Q99742 590 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF556Q9HAH1 456 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 REV1Q9UBZ9 1251 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CEP295Q9C0D2 2601 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 G3V3Y1 287 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NUDT14O95848 222 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 HPP00738 406 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FBXO45P0C2W1 286 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ADH7P40394 386 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 OMPP47874 163 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RPP38P78345 283 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RPS19BP1Q86WX3 136 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ACOT11Q8WXI4 607 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NACC2Q96BF6 587 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RDH12Q96NR8 316 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PSD2Q9BQI7 771 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 EGLN3Q9H6Z9 239 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IL20RAQ9UHF4 553 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ICAM5Q9UMF0 924 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 BOD1L1Q8NFC6 3051 aa13.76□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MGAQ8IWI9 3026 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ARRDC5A6NEK1 342 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LRRN3E7EW58 273 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 H0YAE9 185 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FMO6PO60774 539 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LYNP07948 512 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 WT1P19544 449 aaPredicted RBP13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CCNA2P20248 432 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TCEA1P23193 301 aaKnown RBP13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CHMP24386 653 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IFNA8P32881 189 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PTGDSP41222 190 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CHAF1BQ13112 559 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 C1orf94Q6P1W5 598 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RRM2BQ7LG56 351 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LSMEM1Q8N8F7 131 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 C3orf49Q96BT1 292 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GABARAPL3Q9BY60 117 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PLA2G12AQ9BZM1 189 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 UCK2Q9BZX2 261 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 POLR2J3Q9H1A7 115 aaKnown RBP13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KLRF1Q9NZS2 232 aa13.75□□□□□ -0.21
CSGALNACT1-211ENST00000522854 H3BNH8 94 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ADAP00813 363 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MAKP20794 623 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CHN2P52757 468 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PTGES3Q15185 160 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MEP1AQ16819 746 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RFX4Q33E94 735 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF791Q3KP31 576 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF613Q6PF04 617 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MBOAT2Q6ZWT7 520 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KIF18BQ86Y91 864 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF563Q8TA94 476 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CNIH3Q8TBE1 160 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PSMF1Q92530 271 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TMCO6Q96DC7 493 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 THOC3Q96J01 351 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 DPH1Q9BZG8 443 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TRIM2Q9C040 744 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MED11Q9P086 117 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RPS6KB2Q9UBS0 482 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MGAT4BQ9UQ53 548 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GMPPBQ9Y5P6 360 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CHCHD2Q9Y6H1 151 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 A0A1W2PQD3 144 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 H3BN98 237 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SLC16A6O15403 523 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CHP2O43745 196 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PRKAR1AP10644 381 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms