RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TRAF3Q13114 568 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 UBE2V2Q15819 145 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MS4A18Q3C1V0 323 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 SPATS1Q496A3 300 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 SAPCD1Q5SSQ6 148 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 REEP3Q6NUK4 255 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 ZNF730Q6ZMV8 503 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 Q6ZSR3 168 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 HDDC2Q7Z4H3 204 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 DCXRQ7Z4W1 244 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 DCP1BQ8IZD4 617 aaKnown RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 TCEANCQ8N8B7 351 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 KBTBD3Q8NAB2 608 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 ING5Q8WYH8 240 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 DLX4Q92988 240 aaPredicted RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 ECHDC3Q96DC8 303 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 CAPNS2Q96L46 248 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 JSRP1Q96MG2 331 aaPredicted RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 CNN2Q99439 309 aaKnown RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 CTRCQ99895 268 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MAPKAP1Q9BPZ7 522 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 NEURL2Q9BR09 285 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 FEM1AQ9BSK4 669 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MED10Q9BTT4 135 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 PPA2Q9H2U2 334 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 CPVLQ9H3G5 476 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 CD209Q9NNX6 404 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 OR2S2Q9NQN1 319 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 DCAF13Q9NV06 445 aaKnown RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 GPATCH2LQ9NWQ4 482 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 C11orf21Q9P2W6 132 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 IL36RNQ9UBH0 155 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 NUP50Q9UKX7 468 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MYO6Q9UM54 1294 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 AK6Q9Y3D8 172 aaKnown RBP3.52□□□□□ -1.85
SKP1-209ENST00000522552 ZMYM2Q9UBW7 1377 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 SYNJ2O15056 1496 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 A0A087WZ39 114 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 OTOL1A6NHN0 477 aaPredicted RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 TMEM210A6NLX4 147 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 M0R3G1 203 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 PSTPIP1O43586 416 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 XPNPEP2O43895 674 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 RBBP9O75884 186 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 ATP5LO75964 103 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 OAZ2O95190 189 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 VAPBO95292 243 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 FGF19O95750 216 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 LATS1O95835 1130 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 MMP1P03956 469 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 RPN2P04844 631 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 FAM157CP0CG43 387 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 NR2C1P13056 603 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GABRR2P28476 465 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GNPDA1P46926 289 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 MRPL19P49406 292 aaKnown RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 UCNP55089 124 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 IRX1P78414 480 aaPredicted RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 DR1Q01658 176 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 RGS1Q08116 209 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 CALCOCO2Q13137 446 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 FADDQ13158 208 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 TUBA3CQ13748 450 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GTF2H2Q13888 395 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GRB7Q14451 532 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 EZH2Q15910 746 aaKnown RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 DUSP5Q16690 384 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 KYAT1Q16773 422 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 ISXQ2M1V0 245 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 ASPRV1Q53RT3 343 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 FGD3Q5JSP0 725 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 WASHC2DQ5SRD0 308 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 C1orf220Q5T0J3 134 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 ZNF691Q5VV52 312 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 STUMQ69YW2 141 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GTF2H2CQ6P1K8 395 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 FAM171BQ6P995 826 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 MBOAT1Q6ZNC8 495 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 HSD11B1LQ7Z5J1 315 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 KMT5CQ86Y97 462 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 DHRSXQ8N5I4 330 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 INO80EQ8NBZ0 244 aaPredicted RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 ICA1LQ8NDH6 482 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 PLPPR1Q8TBJ4 325 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 TCP10LQ8TDR4 215 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 UBE2E3Q969T4 207 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 SDSLQ96GA7 329 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 CPXM1Q96SM3 734 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 IL12RB2Q99665 862 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 NAT9Q9BTE0 207 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 MAP1LC3CQ9BXW4 147 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 PARD6GQ9BYG4 376 aaPredicted RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 C3orf14Q9HBI5 128 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 APOBEC3GQ9HC16 384 aaKnown RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 PARD6AQ9NPB6 346 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 POLR2AP24928 1970 aaKnown RBP3.51□□□□□ -1.85
SKP1-209ENST00000522552 CKAP5Q14008 2032 aa3.51□□□□□ -1.85
SKP1-209ENST00000522552 GOLGA8IPA6NC78 632 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms