RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ULK3Q6PHR2 472 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 CADM2Q8N3J6 435 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 RNF167Q9H6Y7 350 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 CARD8Q9Y2G2 431 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 APOL3O95236 402 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 IL33O95760 270 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 NGFRP08138 427 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 SAGP10523 405 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-214ENST00000522165 MYL12AP19105 171 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 SOX3P41225 446 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 HLA-BQ31612 363 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 ANKDD1AQ495B1 522 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 PLK5Q496M5 336 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 PERM1Q5SV97 790 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 NXNL2Q5VZ03 156 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 KBTBD8Q8NFY9 601 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 HOXD1Q9GZZ0 328 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 RPS6KB2Q9UBS0 482 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 SLC35A3Q9Y2D2 325 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 CORINQ9Y5Q5 1042 aa23.8■■□□□ 1.4
COL13A1-214ENST00000522165 SIGLEC6O43699 453 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 PTP4A3O75365 173 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 ENDOUP21128 410 aaKnown RBP23.79■■□□□ 1.4
COL13A1-214ENST00000522165 MLLT11Q13015 90 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-214ENST00000522165 SMARCD3Q6STE5 483 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 LNX2Q8N448 690 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 BBS1Q8NFJ9 593 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 PIGKQ92643 395 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 MKKSQ9NPJ1 570 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-214ENST00000522165 HINT3Q9NQE9 182 aaKnown RBP23.79■■□□□ 1.4
COL13A1-214ENST00000522165 FRG2CA6NGY1 282 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 NSDHLQ15738 373 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 THSD4Q6ZMP0 1018 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 OR6Q1Q8NGQ2 317 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 OIT3Q8WWZ8 545 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 ADIPOR1Q96A54 375 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 LCORQ96JN0 433 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-214ENST00000522165 NUDT9Q9BW91 350 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 AKIP1Q9NQ31 210 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 FBXO8Q9NRD0 319 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 UBQLN4Q9NRR5 601 aa23.79■■□□□ 1.4
COL13A1-214ENST00000522165 J3QRK9 145 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.78■■□□□ 1.4
COL13A1-214ENST00000522165 CPOQ8IVL8 374 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 PRSS58Q8IYP2 241 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 FAM71CQ8NEG0 241 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 DACH2Q96NX9 599 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 VN1R1Q9GZP7 353 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 CHCHD3Q9NX63 227 aaKnown RBP23.78■■□□□ 1.4
COL13A1-214ENST00000522165 EXOSC1Q9Y3B2 195 aaKnown RBP23.78■■□□□ 1.4
COL13A1-214ENST00000522165 FER1L5A0AVI2 2057 aa23.78■■□□□ 1.4
COL13A1-214ENST00000522165 TMEM129A0AVI4 362 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 CLDN25C9JDP6 229 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 HCN1O60741 890 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 HTR1FP30939 366 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 ADH7P40394 386 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 RPS3AP61247 264 aaKnown RBP23.77■■□□□ 1.4
COL13A1-214ENST00000522165 FNDC7Q5VTL7 733 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 CXXC5Q7LFL8 322 aaKnown RBP23.77■■□□□ 1.4
COL13A1-214ENST00000522165 LAPTM4BQ86VI4 370 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 SLITRK4Q8IW52 837 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 ZNF440Q8IYI8 595 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 OR14A16Q8NHC5 309 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 EDAQ92838 391 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 SRPK3Q9UPE1 567 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 TRAV27A0A087WT01 109 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 A0A1W2PQM1 296 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 LAMTOR5O43504 91 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 GPX5O75715 221 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 ANKRD34CP0C6C1 535 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 SHFQ7M4L6 423 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 ZNF527Q8NB42 609 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 DAZLQ92904 295 aaKnown RBP23.77■■□□□ 1.4
COL13A1-214ENST00000522165 FN3KQ9H479 309 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 PALMDQ9NP74 551 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 MKL2Q9ULH7 1088 aa23.77■■□□□ 1.4
COL13A1-214ENST00000522165 IDUAP35475 653 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 WNT4P56705 351 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 CCL7P80098 99 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 ZNF846Q147U1 533 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 RHBDD2Q6NTF9 364 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 FAM181AQ8N9Y4 354 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 OR51A7Q8NH64 312 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 DNAJA4Q8WW22 397 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-214ENST00000522165 S100ZQ8WXG8 99 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 ART5Q96L15 291 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 IFT27Q9BW83 186 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 HMG20AQ9NP66 347 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 NDUFB11Q9NX14 153 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 H2AFY2Q9P0M6 372 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-214ENST00000522165 CTSFQ9UBX1 484 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 EXOGQ9Y2C4 368 aaKnown RBP23.76■■□□□ 1.39
COL13A1-214ENST00000522165 COL6A3P12111 3177 aa23.76■■□□□ 1.39
COL13A1-214ENST00000522165 SYNDIG1LA6NDD5 238 aa23.75■■□□□ 1.39
COL13A1-214ENST00000522165 SOCS6O14544 535 aa23.75■■□□□ 1.39
COL13A1-214ENST00000522165 UTS2O95399 124 aa23.75■■□□□ 1.39
COL13A1-214ENST00000522165 GPR143P51810 404 aa23.75■■□□□ 1.39
COL13A1-214ENST00000522165 CRYZQ08257 329 aaKnown RBP23.75■■□□□ 1.39
COL13A1-214ENST00000522165 CD226Q15762 336 aa23.75■■□□□ 1.39
COL13A1-214ENST00000522165 COX15Q7KZN9 410 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms