RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 VAMP1P23763 118 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 PIK3CGP48736 1102 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 TPM4P67936 248 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 BEAN1Q3B7T3 259 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 FBXW9Q5XUX1 488 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 RAD9BQ6WBX8 426 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 LRRC70Q7Z2Q7 622 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 SPATA19Q7Z5L4 167 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 BPIFB2Q8N4F0 458 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 SYT14Q8NB59 555 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 OR7G2Q8NG99 324 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 OR9A2Q8NGT5 310 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 WDR60Q8WVS4 1066 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 MRGPRX4Q96LA9 322 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 DOK1Q99704 481 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 CITED1Q99966 193 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 CA10Q9NS85 328 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 ICAM5Q9UMF0 924 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 DNAH3Q8TD57 4116 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 DNAH9Q9NYC9 4486 aa7.66□□□□□ -1.18
TRAPPC9-212ENST00000521944 GOLGA6L10A6NI86 522 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 FOXE1O00358 373 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 PIN1P1O15428 100 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 PRSS23O95084 383 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 UTS2O95399 124 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 TPM1P09493 284 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 CD1DP15813 335 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 OMGP23515 440 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 MRPS22P82650 360 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 GRAMD1BQ3KR37 738 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 TMEM176BQ3YBM2 270 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 VAX1Q5SQQ9 334 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 SEL1L2Q5TEA6 688 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 FAM219BQ5XKK7 198 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 ASPHD2Q6ICH7 369 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 TTC27Q6P3X3 843 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 REC114Q7Z4M0 266 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 SLC43A2Q8N370 569 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 SLC16A11Q8NCK7 471 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 OR4C3Q8NH37 302 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 OR51F2Q8NH61 342 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 KLHL29Q96CT2 875 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 REXO5Q96IC2 774 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 ZNF48Q96MX3 618 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 RBM4BQ9BQ04 359 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 MRPL1Q9BYD6 325 aaKnown RBP7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 RAB1BQ9H0U4 201 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 NTN4Q9HB63 628 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 CD274Q9NZQ7 290 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 MCM8Q9UJA3 840 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 OR10H1Q9Y4A9 318 aa7.65□□□□□ -1.18
TRAPPC9-212ENST00000521944 TRAV20A0A0B4J274 112 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CIB4A0PJX0 185 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 C1orf226A1L170 272 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 ZNF724A8MTY0 619 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 K7EPI3 171 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 KLF11O14901 512 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 PLOD3O60568 738 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CYTIPO60759 359 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 SEMA3DO95025 777 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 KRT14P02533 472 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 TPM3P06753 285 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 COL8A2P25067 703 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 RAB10P61026 200 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 PSPHP78330 225 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 SLC18A2Q05940 514 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 RASGEF1BQ0VAM2 473 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 GALNT1Q10472 559 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 TRADDQ15628 312 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 SPANXN3Q5MJ09 141 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 ELFN2Q5R3F8 820 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CCNYL2Q5T2Q4 361 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 PDSS1Q5T2R2 415 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 DOK3Q7L591 496 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 SYCE1Q8N0S2 351 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 BCL6BQ8N143 479 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 TXLNBQ8N3L3 684 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CDYL2Q8N8U2 506 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 TOR1AIP2Q8NFQ8 470 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 TRIM58Q8NG06 486 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 ACTRT2Q8TDY3 377 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 UBTD2Q8WUN7 234 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 NEU4Q8WWR8 484 aaPredicted RBP7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 ERP27Q96DN0 273 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CCT8L2Q96SF2 557 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 CAB39LQ9H9S4 337 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 KLHL9Q9P2J3 617 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 ADAM29Q9UKF5 820 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 RNF11Q9Y3C5 154 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 PCDHB14Q9Y5E9 798 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 MMP24Q9Y5R2 645 aa7.64□□□□□ -1.19
TRAPPC9-212ENST00000521944 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
TRAPPC9-212ENST00000521944 IGHV1-18A0A0C4DH31 117 aa7.63□□□□□ -1.19
TRAPPC9-212ENST00000521944 GXYLT2A0PJZ3 443 aa7.63□□□□□ -1.19
TRAPPC9-212ENST00000521944 ALG1L2C9J202 215 aa7.63□□□□□ -1.19
TRAPPC9-212ENST00000521944 G3V4G9 280 aa7.63□□□□□ -1.19
TRAPPC9-212ENST00000521944 GOLGA6L19H0YKK7 550 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms