RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C18orf21Q32NC0 220 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SOWAHCQ53LP3 525 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 AGBL2Q5U5Z8 902 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 IRGCQ6NXR0 463 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FIGLAQ6QHK4 219 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SPESP1Q6UW49 350 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SUSD1Q6UWL2 747 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ZYG11AQ6WRX3 759 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 MBOAT1Q6ZNC8 495 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CDHR3Q6ZTQ4 885 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FAM92BQ6ZTR7 304 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FRA10AC1Q70Z53 315 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 DGLUCYQ7Z3D6 616 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PRSS42Q7Z5A4 293 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 THOC6Q86W42 341 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 C4orf33Q8N1A6 199 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CHCHD4Q8N4Q1 142 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 DNAJC22Q8N4W6 341 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 LSMEM1Q8N8F7 131 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 BANPQ8N9N5 519 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PPFIBP2Q8ND30 876 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 OR2L3Q8NG85 312 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 OR2A1Q8NGT9 310 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 RDH11Q8TC12 318 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 UTP15Q8TED0 518 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 UBTD2Q8WUN7 234 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ESAMQ96AP7 390 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SLC22A18Q96BI1 424 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TLCD1Q96CP7 247 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TGM7Q96PF1 710 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 OR4K3Q96R72 315 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SMC6Q96SB8 1091 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 RUFY1Q96T51 708 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 MAP3K3Q99759 626 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 EGFL8Q99944 293 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CAPS2Q9BXY5 557 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PITPNM3Q9BZ71 974 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 STRADBQ9C0K7 418 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CHRNA10Q9GZZ6 450 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ATG10Q9H0Y0 220 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CENPHQ9H3R5 247 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SYNDIG1Q9H7V2 258 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CNOT10Q9H9A5 744 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CCDC177Q9NQR7 707 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF446Q9NWS9 450 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 UTP6Q9NYH9 597 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 NUDT4Q9NZJ9 180 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 AKAP7Q9P0M2 348 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM9Q9P0T7 183 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CPSF2Q9P2I0 782 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ANKMY1Q9P2S6 941 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FBXL17Q9UF56 701 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TAC3Q9UHF0 121 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 EMCNQ9ULC0 261 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SNX7Q9UNH6 387 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PLLPQ9Y342 182 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 KLK4Q9Y5K2 254 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CACNA1HO95180 2353 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 BDP1A6H8Y1 2624 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PLXND1Q9Y4D7 1925 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 MN1Q10571 1320 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SHROOM3Q8TF72 1996 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 IGKV3D-15A0A087WSY6 115 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 KCNE1BA0A087WTH5 132 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 IGHV5-51A0A0C4DH38 117 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 IGKV1-8A0A0C4DH67 115 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0J9YY10 115 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1W2PPI3 338 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TRBC2A0A5B9 178 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 OR2A25A4D2G3 310 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FAM149AA5PLN7 773 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TRABD2BA6NFA1 517 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NCF1BA6NI72 391 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 A8MT66 165 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 A8MU76 341 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NCF1CA8MVU1 366 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 G3V2L1 256 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 K7EPI3 171 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 DYNC1I1O14576 645 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CTDSP2O14595 271 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TM9SF1O15321 606 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 TYROBPO43914 113 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PLOD3O60568 738 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SRPX2O60687 465 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 SPAG7O75391 227 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ZWINTO95229 277 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 C1GALT1C1LP0DN25 315 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 MYL2P10916 166 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CCL4P13236 92 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 GFAPP14136 432 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NCF1P14598 390 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 FOLR1P15328 257 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 NELFEP18615 380 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EPORP19235 508 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 IMPDH1P20839 514 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 PSMB5P28074 263 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 EEF1DP29692 281 aaKnown RBP2.9□□□□□ -1.95
VPS13B-209ENST00000521559 ALDH3A1P30838 453 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CHRNB4P30926 498 aa2.9□□□□□ -1.95
VPS13B-209ENST00000521559 CSTF2P33240 577 aaKnown RBP eCLIP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms