RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 FOXF1Q12946 379 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 SELENBP1Q13228 472 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 GCNT6Q5T4J0 391 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 PRAMEF8Q5VWM4 474 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 PRAMEF7Q5VXH5 474 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 GTF2IRD2BQ6EKJ0 949 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 PPP4R4Q6NUP7 873 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 OLIG3Q7RTU3 272 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 GTF2IRD2Q86UP8 949 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 ZNF440Q8IYI8 595 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 LILRA2Q8N149 483 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 SLC38A5Q8WUX1 472 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 SFXN3Q9BWM7 321 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 IFT52Q9Y366 437 aa16.59■□□□□ 0.25
SREK1-207ENST00000520058 SPIN1Q9Y657 262 aaPredicted RBP16.59■□□□□ 0.25
SREK1-207ENST00000520058 PRAMEF27A3QJZ7 478 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 DYNC1I1O14576 645 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 TFPTP0C1Z6 253 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 PABPC4LP0CB38 370 aaKnown RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 BMP2P12643 396 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 NID1P14543 1247 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 PRKCAP17252 672 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 FKBP2P26885 142 aaKnown RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 GRNP28799 593 aaKnown RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 ASCL1P50553 236 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 SUCLG1P53597 346 aaKnown RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 CLDN20P56880 219 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 CDSNQ15517 529 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 MAPK14Q16539 360 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 NDUFAF6Q330K2 333 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 LIN52Q52LA3 116 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 PAGE3Q5JUK9 113 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 DPP10Q8N608 796 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 C9orf106Q8NAJ2 232 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 BBS10Q8TAM1 723 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 MARVELD3Q96A59 401 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 KLHL15Q96M94 604 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 SPOCK3Q9BQ16 436 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 TREX2Q9BQ50 279 aaPredicted RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 NSRP1Q9H0G5 558 aaKnown RBP16.58■□□□□ 0.24
SREK1-207ENST00000520058 ZNF385DQ9H6B1 395 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 A4GALTQ9NPC4 353 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 SLC52A3Q9NQ40 469 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 VAPAQ9P0L0 249 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 GMEB1Q9Y692 573 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 PKDREJQ9NTG1 2253 aa16.58■□□□□ 0.24
SREK1-207ENST00000520058 OIP5O43482 229 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 PLGP00747 810 aaPredicted RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 C1QCP02747 245 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 PSMA4P25789 261 aaKnown RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 SLC7A1P30825 629 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 RYKP34925 604 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 APOBEC1P41238 236 aaKnown RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 HTR3AP46098 478 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 ZNF136P52737 540 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 NFYCQ13952 458 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 PON3Q15166 354 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 SLC25A53Q5H9E4 307 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 HBMQ6B0K9 141 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 ZNF787Q6DD87 383 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 HIST2H2BCQ6DN03 193 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 C3orf33Q6P1S2 294 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 GGNQ86UU5 652 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 KRT73Q86Y46 540 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 FAM71CQ8NEG0 241 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 OR52P1PQ8NH57 321 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 INTS12Q96CB8 462 aaKnown RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 ZG16BQ96DA0 208 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 TMEM19Q96HH6 336 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 SH3GL1Q99961 368 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 SPATA5L1Q9BVQ7 753 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 QRSL1Q9H0R6 528 aaKnown RBP16.57■□□□□ 0.24
SREK1-207ENST00000520058 PIGMQ9H3S5 423 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 ACER3Q9NUN7 267 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 SLC25A37Q9NYZ2 338 aa16.57■□□□□ 0.24
SREK1-207ENST00000520058 BBIP1A8MTZ0 92 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 EEF1E1-BLOC1S5C9J1V9 151 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 ADAMDEC1O15204 470 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 EEF1E1O43324 174 aaKnown RBP16.56■□□□□ 0.24
SREK1-207ENST00000520058 DNAJA2O60884 412 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 THBS1P07996 1170 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 GPX2P18283 190 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 RPS4Y1P22090 263 aaKnown RBP16.56■□□□□ 0.24
SREK1-207ENST00000520058 SLC6A2P23975 617 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 SFTPDP35247 375 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 CARD18P57730 90 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 COPZ1P61923 177 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 MERTKQ12866 999 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 REEP3Q6NUK4 255 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 MEX3BQ6ZN04 569 aaKnown RBP16.56■□□□□ 0.24
SREK1-207ENST00000520058 MCEMP1Q8IX19 187 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 PCYOX1LQ8NBM8 494 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 NAXEQ8NCW5 288 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 OR10D3Q8NH80 312 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 OR2V1Q8NHB1 315 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 POC1BQ8TC44 478 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 SLC25A43Q8WUT9 341 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms