RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 PIF1Q9H611 641 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 RNF122Q9H9V4 155 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 PLSCR4Q9NRQ2 329 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 DNAJB12Q9NXW2 375 aaKnown RBP8.39□□□□□ -1.07
HDAC3-215ENST00000519474 MKLN1Q9UL63 735 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF175Q9Y473 711 aa8.39□□□□□ -1.07
HDAC3-215ENST00000519474 SERINC4A6NH21 518 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 CCDC154A6NI56 674 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 A6NNC1 897 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 C9JVG2 144 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 E9PBE3 544 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SLCO1B7G3V0H7 640 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 CXCL13O43927 109 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 DNAJA2O60884 412 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 UGT2B17O75795 530 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NTN1O95631 604 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 GUSBP08236 651 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NID1P14543 1247 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF17P17021 662 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ADH6P28332 368 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SHC1P29353 583 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 DNAJA1P31689 397 aaKnown RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SOAT1P35610 550 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 GNALP38405 381 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 PCYT1AP49585 367 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 CLNS1AP54105 237 aaKnown RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SORDQ00796 357 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 MAPK14Q16539 360 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 DPY19L1Q2PZI1 675 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 FAM174BQ3ZCQ3 159 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SLC25A53Q5H9E4 307 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 PDZK1Q5T2W1 519 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 OR2A2Q6IF42 318 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 MAVSQ7Z434 540 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 TMEM200AQ86VY9 491 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 LILRA2Q8N149 483 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 LILRB2Q8N423 598 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF527Q8NB42 609 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 OR10D3Q8NH80 312 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 RAB3IL1Q8TBN0 382 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ZFAND2BQ8WV99 257 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 ARSGQ96EG1 525 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NEURL3Q96EH8 262 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 CCDC115Q96NT0 180 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 WFIKKN1Q96NZ8 548 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 POLDIP3Q9BY77 421 aaKnown RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NMUR2Q9GZQ4 415 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 LAT2Q9GZY6 243 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 GALNT8Q9NY28 637 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 NKIRAS1Q9NYS0 192 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 MARCOQ9UEW3 520 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-215ENST00000519474 BTNL2Q9UIR0 455 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 PACSIN3Q9UKS6 424 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 GMEB1Q9Y692 573 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 FBN2P35556 2912 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 PDZD2O15018 2839 aa8.38□□□□□ -1.07
HDAC3-215ENST00000519474 CENPVL1A0A0U1RR11 272 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 TRPC5OSA6NMA1 111 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 H3BNH8 94 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 HMGN4O00479 90 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 TNFSF11O14788 317 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 KLF11O14901 512 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF264O43296 627 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 EIF4E2O60573 245 aaKnown RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 STX11O75558 287 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 SMNDC1O75940 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 PGRP06401 933 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 FESP07332 822 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 PRKCAP17252 672 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CDKN2CP42773 168 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 IST1P53990 364 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CARD18P57730 90 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 SIRPAP78324 504 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 FUT5Q11128 374 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 TMEM176BQ3YBM2 270 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 LRRC23Q53EV4 343 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 TYW3Q6IPR3 259 aaKnown RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF621Q6ZSS3 439 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 C22orf34Q6ZV56 151 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ESPNLQ6ZVH7 1005 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CDH24Q86UP0 819 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CNEP1R1Q8N9A8 125 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 OR5W2Q8NH69 310 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 OR2V1Q8NHB1 315 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ROBO4Q8WZ75 1007 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms