RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ARL9Q6T311 187 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 KCNRGQ8N5I3 272 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 POMGNT2Q8NAT1 580 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ABHD4Q8TB40 342 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 CPNE4Q96A23 557 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ZC3H10Q96K80 434 aaKnown RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF354BQ96LW1 612 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 OPA3Q9H6K4 179 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MAN2C1Q9NTJ4 1040 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MOKQ9UQ07 419 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 SLC22A14Q9Y267 594 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 A0A1W2PRQ8 180 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MGAT4DA6NG13 374 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 GABARAPH6UMI1 98 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 J3QRE1 110 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 KRT33AO76009 404 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 EPXP11678 715 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 CXADRP78310 365 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 FOXK2Q01167 660 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MPPED2Q15777 294 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 RAB12Q6IQ22 244 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 CDC73Q6P1J9 531 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 LINGO4Q6UY18 593 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 C15orf54Q8N8G6 183 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MORN4Q8NDC4 146 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 ACOT11Q8WXI4 607 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 RFKQ969G6 155 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 EID2BQ96D98 161 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 MYEOVQ96EZ4 313 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 NAA11Q9BSU3 229 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-208ENST00000519004 PINK1Q9BXM7 581 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 REEP4Q9H6H4 257 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 PCDHGC4Q9Y5F7 938 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 PTPRDP23468 1912 aa12.61□□□□□ -0.39
PABPC1-208ENST00000519004 A0A1W2PQH9 124 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ANKRD66B4E2M5 251 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 PTGESO14684 152 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 BCL2L11O43521 198 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 APEHP13798 732 aaKnown RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 OR1E1P30953 314 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 AHRP35869 848 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 RHOUQ7L0Q8 258 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 DNAJB7Q7Z6W7 309 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 SYT9Q86SS6 491 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF546Q86UE3 836 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 MEGF10Q96KG7 1140 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 FCRL4Q96PJ5 515 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 NEU1Q99519 415 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 DZANK1Q9NVP4 752 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 IL17CQ9P0M4 197 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 KLHL9Q9P2J3 617 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 WNT10BO00744 389 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ZNF749O43361 778 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 LATS1O95835 1130 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 BCHEP06276 602 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 NQO2P16083 231 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CR2P20023 1033 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ITGA3P26006 1051 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 DCTDP32321 178 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CASP6P55212 293 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 TMPRSS11BQ86T26 416 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 COMTD1Q86VU5 262 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 APCDD1Q8J025 514 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 OR10H5Q8NGA6 315 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 BRIX1Q8TDN6 353 aaKnown RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 SLC39A7Q92504 469 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 C14orf79Q96F83 325 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 ZBED3Q96IU2 234 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-208ENST00000519004 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 TMEM231Q9H6L2 316 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 CHD5Q8TDI0 1954 aa12.6□□□□□ -0.39
PABPC1-208ENST00000519004 HELZP42694 1942 aaKnown RBP12.59□□□□□ -0.39
PABPC1-208ENST00000519004 OR14I1A6ND48 311 aa12.59□□□□□ -0.39
PABPC1-208ENST00000519004 GAPDHSO14556 408 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms