RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ADNPQ9H2P0 1102 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 SLC25A19Q9HC21 320 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZBTB20Q9HC78 741 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 SCN3BQ9NY72 215 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 CARD8Q9Y2G2 431 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
TRAPPC9-205ENST00000518839 SPAARA0A1B0GVQ0 90 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 KLF4O43474 513 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 IGF2P01344 180 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 FBXO45P0C2W1 286 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 IFI30P13284 250 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 CEACAM1P13688 526 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 PGCP20142 388 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 POU1F1P28069 291 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 ELK4P28324 431 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 OTX2P32243 289 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 CCR4P51679 360 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 SMSP52788 366 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 CTBP2P56545 445 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 CTU2Q2VPK5 515 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 BROXQ5VW32 411 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 C12orf73Q69YU5 71 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMPRSS11FQ6ZWK6 438 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 RAB43Q86YS6 212 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 P3H2Q8IVL5 708 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 ENTHD1Q8IYW4 607 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 OR5W2Q8NH69 310 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 THAP3Q8WTV1 239 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 OSTF1Q92882 214 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 HGDQ93099 445 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 SLC19A3Q9BZV2 496 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 LIN28AQ9H9Z2 209 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 SDHAF3Q9NRP4 125 aa13.79□□□□□ -0.2
TRAPPC9-205ENST00000518839 A0A087WUJ7 227 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 TRIM64CA6NLI5 447 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 SLC1A7O00341 560 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 TP53I11O14683 189 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 HCRTR2O43614 444 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 MRPS14O60783 128 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ADAM11O75078 769 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 TP53P04637 393 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 CRHBPP24387 322 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 RBMS1P29558 406 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 DLSTP36957 453 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 RPL5P46777 297 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 P2RX1P51575 399 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 NR1H2P55055 460 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZNF117Q03924 483 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 C17orf67Q0P5P2 114 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 CBFBQ13951 182 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 NTRK2Q16620 822 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 NDUFAF6Q330K2 333 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 FAM69BQ5VUD6 431 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 OPN5Q6U736 354 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 LYPD8Q6UX82 237 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ISLR2Q6UXK2 745 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 WDR88Q6ZMY6 472 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ARMC10Q8N2F6 343 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 RHOXF1Q8NHV9 184 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 B4GALNT2Q8NHY0 566 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ZNF563Q8TA94 476 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 C3orf49Q96BT1 292 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 SPACA9Q96E40 222 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 IP6K3Q96PC2 410 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 CCNB1IP1Q9NPC3 277 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 CNIH4Q9P003 139 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 ICAM5Q9UMF0 924 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 YARS2Q9Y2Z4 477 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 PCDHGB6Q9Y5F9 930 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 CDH10Q9Y6N8 788 aa13.78□□□□□ -0.2
TRAPPC9-205ENST00000518839 SH3D21A4FU49 640 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 A6NHS1 94 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 UNC119BA6NIH7 251 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 ELOA3DA6NLF2 546 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 SCO2O43819 266 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 OR2J2O76002 312 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 RCBTB2O95199 551 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 SOX14O95416 240 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 EEF1B2P24534 225 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 MSX1P28360 303 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 SLC1A3P43003 542 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 GPR4P46093 362 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 GIPRP48546 466 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 FBXW4P57775 412 aa13.77□□□□□ -0.21
TRAPPC9-205ENST00000518839 GABREP78334 506 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms