RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GDF1P27539 372 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 RYKP34925 604 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 OR1E2P47887 323 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 PMP22Q01453 160 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 NPTX1Q15818 432 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 RNFT1Q5M7Z0 435 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 LACC1Q8IV20 430 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 FAM109AQ8N4B1 249 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 TMEM251Q8N6I4 163 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 LSMEM1Q8N8F7 131 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 VANGL1Q8TAA9 524 aaPredicted RBP19.06■□□□□ 0.64
LSM6-207ENST00000515311 ST8SIA1Q92185 356 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 TAAR6Q96RI8 345 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 KLHDC3Q9BQ90 382 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 WFDC6Q9BQY6 131 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 ZNF559Q9BR84 538 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 OR2B2Q9GZK3 357 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 MED17Q9NVC6 651 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 ANAPC2Q9UJX6 822 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 V9GYQ6 96 aa19.06■□□□□ 0.64
LSM6-207ENST00000515311 DHRS12A0PJE2 317 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 FAM166BA8MTA8 275 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 ETV2O00321 342 aaPredicted RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 CRYABP02511 175 aaKnown RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 PSMA4P25789 261 aaKnown RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 MAGEA5P43359 124 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 DLX5P56178 289 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 ACTR3P61158 418 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 COPZ1P61923 177 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 CCNIQ14094 377 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 QPRTQ15274 297 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 PLPPR5Q32ZL2 321 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 GLYR1Q49A26 553 aaPredicted RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 FAM98BQ52LJ0 330 aaKnown RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 ARSKQ6UWY0 536 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 ADGRG5Q8IZF4 528 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 TMEM234Q8WY98 164 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 SLC39A7Q92504 469 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 ZBTB8AQ96BR9 441 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 SLC47A1Q96FL8 570 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 C7orf34Q96L11 122 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 TRIM2Q9C040 744 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 POLR2J2Q9GZM3 115 aaKnown RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 POLR2J3Q9H1A7 115 aaKnown RBP19.05■□□□□ 0.64
LSM6-207ENST00000515311 ZDHHC11Q9H8X9 412 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 IL1RAPQ9NPH3 570 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 TAS2R10Q9NYW0 307 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 LUZP4Q9P127 313 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 DKKL1Q9UK85 242 aa19.05■□□□□ 0.64
LSM6-207ENST00000515311 SPTA1P02549 2419 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 TFECO14948 347 aaPredicted RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 CDC40O60508 579 aaKnown RBP eCLIP19.04■□□□□ 0.64
LSM6-207ENST00000515311 TPST2O60704 377 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 IDH2P48735 452 aaKnown RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 HOXC5Q00444 222 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 SLC25A53Q5H9E4 307 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 WBP2NLQ6ICG8 309 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 FAM180AQ6UWF9 173 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 RBM45Q8IUH3 476 aaKnown RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 ZNF563Q8TA94 476 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 PHF10Q8WUB8 498 aaKnown RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 RSRC1Q96IZ7 334 aaKnown RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 MCHR1Q99705 422 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 AMBRA1Q9C0C7 1298 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 ACKR4Q9NPB9 350 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 ACER3Q9NUN7 267 aa19.04■□□□□ 0.64
LSM6-207ENST00000515311 PRRC2CQ9Y520 2896 aaKnown RBP19.04■□□□□ 0.64
LSM6-207ENST00000515311 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ANKRD65E5RJM6 399 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ZIC3O60481 467 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 NTN1O95631 604 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 RAP2AP10114 183 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 GP1BBP13224 206 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ZNF17P17021 662 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 PRKCAP17252 672 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ITGA2P17301 1181 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 HTR2AP28223 471 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 EIF1P41567 113 aaKnown RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 SLC1A3P43003 542 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 SESN3P58005 492 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ALDH6A1Q02252 535 aaKnown RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 CHRNB3Q05901 458 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 KPNB1Q14974 876 aaKnown RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 TOMM20Q15388 145 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 TOMM34Q15785 309 aaPredicted RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 TMEM44Q2T9K0 475 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 SIAH3Q8IW03 269 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 FAM83FQ8NEG4 500 aaPredicted RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 MRGPRX4Q96LA9 322 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 SEPHS2Q99611 448 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 DENND2DQ9H6A0 471 aaPredicted RBP19.03■□□□□ 0.64
LSM6-207ENST00000515311 VDAC3Q9Y277 283 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 ENPP4Q9Y6X5 453 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 FREM3P0C091 2139 aa19.03■□□□□ 0.64
LSM6-207ENST00000515311 TRAPPC6AO75865 159 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 HK1P19367 917 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 MST1P26927 711 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 ADH6P28332 368 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 MAGEA2P43356 314 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 HTR3AP46098 478 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms