RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CFPP27918 469 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 CARTPTQ16568 116 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 IMPG1Q17R60 797 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 CR1LQ2VPA4 569 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 LRIG3Q6UXM1 1119 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 COX18Q8N8Q8 333 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 PAFAH2Q99487 392 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 TMEM216Q9P0N5 145 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 ICAM5Q9UMF0 924 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 GPC6Q9Y625 555 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 PMF1-BGLAPU3KQ54 211 aa17.86■□□□□ 0.45
SQSTM1-215ENST00000514093 CCT8L1PA6NM43 557 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 TCF21O43680 179 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 ENO1P06733 434 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 IFI6P09912 130 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 ALOX5P09917 674 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 PRKCAP17252 672 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 ITGA2P17301 1181 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 TAC1P20366 129 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 IMPDH1P20839 514 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 NR4A2P43354 598 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 PDLIM4P50479 330 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 P2RX1P51575 399 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 CHRNB3Q05901 458 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 LCP2Q13094 533 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF544Q6NX49 715 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 NOXRED1Q6NXP6 359 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 C12orf54Q6X4T0 127 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 SSX8Q7RTT4 187 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 GALNT5Q7Z7M9 940 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 RFWD2Q8NHY2 731 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 GPR119Q8TDV5 335 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 JADE3Q92613 823 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 FOXN4Q96NZ1 517 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 OR5B2Q96R09 309 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 SOX7Q9BT81 388 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 ANKZF1Q9H8Y5 726 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 NTMQ9P121 344 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 TRAF6Q9Y4K3 522 aa17.85■□□□□ 0.45
SQSTM1-215ENST00000514093 SERTM1A2A2V5 107 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 CCDC151A5D8V7 595 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF724A8MTY0 619 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 POC1B-GALNT4F8VUJ3 575 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 BMP4P12644 408 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 EFNA1P20827 205 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 SERPINB4P48594 390 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 SERPINB9P50453 376 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 FOXG1P55316 489 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 PKNOX1P55347 436 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 SLC7A5Q01650 507 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 ZNF385BQ569K4 471 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 FBXW9Q5XUX1 488 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 RFLNBQ8N5W9 214 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 CHMP6Q96FZ7 201 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 MS4A4EQ96PG1 132 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 PIMREGQ9BSJ6 248 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 MID1IP1Q9NPA3 183 aa17.84■□□□□ 0.45
SQSTM1-215ENST00000514093 KCNAB3O43448 404 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 H6PDO95479 791 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 LCN1P31025 176 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 POU6F2P78424 691 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 SELENBP1Q13228 472 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 IQCCQ4KMZ1 466 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 IKBIPQ70UQ0 350 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 MEX3DQ86XN8 651 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 CDS1Q92903 461 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 FBXO17Q96EF6 278 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 ZDHHC18Q9NUE0 388 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 WBP11Q9Y2W2 641 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 ACTL7BQ9Y614 415 aa17.83■□□□□ 0.44
SQSTM1-215ENST00000514093 GTPBP1O00178 669 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 AKAP10O43572 662 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 APOBEC3AP31941 199 aaPredicted RBP17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 MST1LQ2TV78 715 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 KLHL26Q53HC5 615 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 MTERF4Q7Z6M4 381 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 DCAKDQ8WVC6 231 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 MRGPRX4Q96LA9 322 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 SORCS2Q96PQ0 1159 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 BTBD2Q9BX70 525 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 ADAM19Q9H013 955 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 QRSL1Q9H0R6 528 aaKnown RBP17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 SH3BP4Q9P0V3 963 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 TENM1Q9UKZ4 2725 aa17.82■□□□□ 0.44
SQSTM1-215ENST00000514093 ATP5F1P24539 256 aaPredicted RBP17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 NTF4P34130 210 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 PRKAA2P54646 552 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 GABRA6Q16445 453 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 C9orf135Q5VTT2 229 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 ZNF614Q8N883 585 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 ANKS4BQ8N8V4 417 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 ZFP28Q8NHY6 868 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 FAM76AQ8TAV0 307 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 DNAJA3Q96EY1 480 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 TRMOQ9BU70 441 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 GSTO2Q9H4Y5 243 aa17.81■□□□□ 0.44
SQSTM1-215ENST00000514093 STK38LQ9Y2H1 464 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms