RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 INTS1Q8N201 2190 aaKnown RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 COL12A1Q99715 3063 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 TRBV5-3A0A0A0MS03 114 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 TRAV20A0A0B4J274 112 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 A0A0G2JPF8 293 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 OR2M5A3KFT3 312 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 AGAP5A6NIR3 686 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 EVPLLA8MZ36 301 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 HNRNPCL2B2RXH8 293 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 B4DXG7 233 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 HNRNPCL3B7ZW38 293 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 H0Y3Z8 333 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 FAAHO00519 579 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 FCMRO60667 390 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 HNRNPCL1O60812 293 aaKnown RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CCDC22O60826 627 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 H6PDO95479 791 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 IL18BPO95998 194 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CSTAP01040 98 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 GSNP06396 782 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CRHP06850 196 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 DBIP07108 87 aaKnown RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SNRPB2P08579 225 aaKnown RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 LINGO3P0C6S8 592 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 HNRNPCL4P0DMR1 293 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 GLI4P10075 376 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 FCGR2AP12318 317 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 NID1P14543 1247 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ETS2P15036 469 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 GPX2P18283 190 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 PGCP20142 388 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 POU3F2P20265 443 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ME2P23368 584 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 PEX19P40855 299 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CRATP43155 626 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 MAP2K6P52564 334 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CLDN18P56856 261 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RPS3AP61247 264 aaKnown RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RAC1P63000 192 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RBBP4Q09028 425 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SKP2Q13309 424 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 LIN52Q52LA3 116 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SLC25A53Q5H9E4 307 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RNF220Q5VTB9 566 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RTL6Q6ICC9 239 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 OR2A2Q6IF42 318 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CGB2Q6NT52 195 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SLC2A7Q6PXP3 512 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CHMP1BQ7LBR1 199 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 GALNT10Q86SR1 603 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SLC30A8Q8IWU4 369 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 PEX5LQ8IYB4 626 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF614Q8N883 585 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 BHLHE22Q8NFJ8 381 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 OR5M9Q8NGP3 310 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 BBS10Q8TAM1 723 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CA5BP1Q8WTZ4 195 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 C10orf82Q8WW14 230 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 RAB8BQ92930 207 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 LRRC46Q96FV0 321 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SH3GL1Q99961 368 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SLC38A1Q9H2H9 487 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 TMEM38AQ9H6F2 299 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 EVA1AQ9H8M9 152 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 BCL2L10Q9HD36 194 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 SLC6A13Q9NSD5 602 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 MED17Q9NVC6 651 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF629Q9UEG4 869 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 MKLN1Q9UL63 735 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 CAMK2AQ9UQM7 478 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
NEDD4-210ENST00000513957 IFT52Q9Y366 437 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF175Q9Y473 711 aa7.4□□□□□ -1.22
NEDD4-210ENST00000513957 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.23
NEDD4-210ENST00000513957 ASH1LQ9NR48 2969 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 MED12Q93074 2177 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TRBV23-1A0A0A0MS06 115 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 ZIC2O95409 532 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 NTN1O95631 604 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 BCHEP06276 602 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 CHRM4P08173 479 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TFPTP0C1Z6 253 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 RNF224P0DH78 156 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 ETFAP13804 333 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 IL7RP16871 459 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PRKCAP17252 672 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PSMA4P25789 261 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 CEACAM8P31997 349 aaPredicted RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 LSP1P33241 339 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PGM1P36871 562 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 NUP107P57740 925 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 KCNJ10P78508 379 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 PMPCAQ10713 525 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SELENBP1Q13228 472 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 LARS2Q15031 903 aaKnown RBP7.39□□□□□ -1.23
NEDD4-210ENST00000513957 SYPL1Q16563 259 aa7.39□□□□□ -1.23
NEDD4-210ENST00000513957 TRMT5Q32P41 509 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms