RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 TMCO2Q7Z6W1 182 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 ADAMTSL2Q86TH1 951 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 ZNF677Q86XU0 584 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 CENPLQ8N0S6 344 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 AKR7LQ8NHP1 331 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 SETD7Q8WTS6 366 aaKnown RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 BCL7BQ9BQE9 202 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 CCDC94Q9BW85 323 aaPredicted RBP3.81□□□□□ -1.8
CHD1-209ENST00000512844 TMEM117Q9H0C3 514 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 SIRPDQ9H106 197 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 COG4Q9H9E3 785 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 QPCTLQ9NXS2 382 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 PLA2G4CQ9UP65 541 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 COMMD3-BMI1R4GMX3 469 aa3.81□□□□□ -1.8
CHD1-209ENST00000512844 KANK1Q14678 1352 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 ZBED9Q6R2W3 1325 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 IGKV6D-21A0A0A0MT36 114 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 GOLGA8OA6NCC3 632 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 ZSCAN5BA6NJL1 495 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 GOLGA8NF8WBI6 632 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 WRBO00258 174 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 SURF6O75683 361 aaKnown RBP3.8□□□□□ -1.8
CHD1-209ENST00000512844 MGMTP16455 207 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 PRKACBP22694 351 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 IGHV1-2P23083 117 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 CCR1P32246 355 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 MAGEA1P43355 309 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 OR3A4PP47883 348 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 HADHBP55084 474 aaKnown RBP3.8□□□□□ -1.8
CHD1-209ENST00000512844 CARD18P57730 90 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 TNFRSF17Q02223 184 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 IL18Q14116 193 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 ZNF699Q32M78 642 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 ZNF528Q3MIS6 628 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 LRIT3Q3SXY7 679 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 TMEM41BQ5BJD5 291 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 METTL11BQ5VVY1 283 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 CCDC80Q76M96 950 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 SLC22A9Q8IVM8 553 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 DNAJA4Q8WW22 397 aaPredicted RBP3.8□□□□□ -1.8
CHD1-209ENST00000512844 SELENOMQ8WWX9 145 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 RASD2Q96D21 266 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 TCEANC2Q96MN5 208 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 MGAT4BQ9UQ53 548 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 GMEB1Q9Y692 573 aa3.8□□□□□ -1.8
CHD1-209ENST00000512844 THOC2Q8NI27 1593 aaKnown RBP3.8□□□□□ -1.8
CHD1-209ENST00000512844 HFM1A2PYH4 1435 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 USP6P35125 1406 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 NCAPD2Q15021 1401 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 CASKIN1Q8WXD9 1431 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 CNTLNQ9NXG0 1405 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 MTUS2Q5JR59 1369 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 UNC13AQ9UPW8 1703 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 MAP3K19Q56UN5 1328 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 FAM240BA0A1B0GVZ2 78 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 A0A1W2PNU3 283 aaPredicted RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 SPECC1L-ADORA2AF8WAN1 911 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 NVLO15381 856 aaKnown RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 YKT6O15498 198 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 MED7O43513 233 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 ANP32DO95626 131 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 ACTL6AO96019 429 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 OTCP00480 354 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 KRT14P02533 472 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 IVLP07476 585 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 RPA2P15927 270 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 NCF2P19878 526 aaPredicted RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 ZP3P21754 424 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 CYP2F1P24903 491 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 PTBP1P26599 531 aaKnown RBP eCLIP3.79□□□□□ -1.8
CHD1-209ENST00000512844 SPP2Q13103 211 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 DNAJC3Q13217 504 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 CUL1Q13616 776 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 PDK4Q16654 411 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 KYAT1Q16773 422 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 DCAF4L1Q3SXM0 396 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 C1orf185Q5T7R7 199 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 ARMC12Q5T9G4 340 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 PNCKQ6P2M8 343 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 CES3Q6UWW8 571 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 MTERF4Q7Z6M4 381 aaKnown RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 MISPQ8IVT2 679 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 GPR65Q8IYL9 337 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 BBS1Q8NFJ9 593 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 OR56B1Q8NGI3 324 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 PEX13Q92968 403 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 ARL5BQ96KC2 179 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 SECISBP2Q96T21 854 aaKnown RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 RIOK1Q9BRS2 568 aaKnown RBP3.79□□□□□ -1.8
CHD1-209ENST00000512844 DPH7Q9BTV6 452 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 C19orf24Q9BVV8 132 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 PARVGQ9HBI0 331 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 VAT1LQ9HCJ6 419 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 NUDCQ9Y266 331 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 MFHAS1Q9Y4C4 1052 aa3.79□□□□□ -1.8
CHD1-209ENST00000512844 WDR97A6NE52 1622 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms