RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MS4A12Q9NXJ0 267 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 ADGRA3Q8IWK6 1321 aa3.64□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1W2PRG6 482 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CLEC18AA5D8T8 446 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 BCKDHBP21953 392 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ACADLP28330 430 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TACR3P29371 465 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RPL4P36578 427 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MAP2K3P46734 347 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PNLIPRP1P54315 467 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MAPK14Q16539 360 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CLEC18BQ6UXF7 455 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CCNI2Q6ZMN8 369 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF517Q6ZMY9 492 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GLRX5Q86SX6 157 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF100Q8IYN0 542 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM199Q8N511 208 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CLEC18CQ8NCF0 446 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR52L2PQ8NGH6 319 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MRPL24Q96A35 216 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RAB40CQ96S21 281 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 YIPF3Q9GZM5 350 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR51E2Q9H255 320 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 AKTIPQ9H8T0 292 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DLL4Q9NR61 685 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 INPP5EQ9NRR6 644 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 KCNIP1Q9NZI2 227 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM59LQ9UK28 342 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OAZ3Q9UMX2 235 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 STARD10Q9Y365 291 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TEX13DA0A0J9YY54 714 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1B0GWJ7 208 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CHP2O43745 196 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 HCN1O60741 890 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NDUFS6O75380 124 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NME6O75414 186 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MMP15P51511 669 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MAGOHP61326 146 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TLE3Q04726 772 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CHRNEQ04844 493 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SELPLGQ14242 412 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PTGISQ16647 500 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 EIF2S3LQ2VIR3 472 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DLEU7Q6UYE1 221 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DBX2Q6ZNG2 339 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 USP30Q70CQ3 517 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PID1Q7Z2X4 250 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 HDDC2Q7Z4H3 204 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ZC3HC1Q86WB0 502 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PDSS2Q86YH6 399 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM217Q8N7C4 229 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 STEAP2Q8NFT2 490 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR2L5Q8NG80 312 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CASKIN2Q8WXE0 1202 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM45BQ96B21 275 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PIWIL1Q96J94 861 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM79Q9BSE2 394 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SLC2A11Q9BYW1 496 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RETNQ9HD89 108 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PCYOX1Q9UHG3 505 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TEX264Q9Y6I9 313 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 MCM3APO60318 1980 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NLRC5Q86WI3 1866 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SCN10AQ9Y5Y9 1956 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF487B1APH4 448 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 H3BTX0 84 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 WNT9AO14904 365 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ITGB2P05107 769 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 XRCC1P18887 633 aaPredicted RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ACKR3P25106 362 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CMPK1P30085 196 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 HPCAL1P37235 193 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PIGAP37287 484 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ALDH3B2P48448 385 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NHLH1Q02575 133 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GANABQ14697 944 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SSPNQ14714 243 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 XKR4Q5GH76 650 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SPIN3Q5JUX0 258 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 SLC26A9Q7LBE3 791 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 NETO2Q8NC67 525 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 B3GNT7Q8NFL0 401 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 OR2L2Q8NH16 312 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 IRF7Q92985 503 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 XPO6Q96QU8 1125 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CYP2S1Q96SQ9 504 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PDZD7Q9H5P4 517 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 GOLGA2P5Q9HBQ8 144 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CDH20Q9HBT6 801 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 DUS2Q9NX74 493 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 FZD1Q9UP38 647 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 CITO14578 2027 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 TDRD15B5MCY1 1934 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 PPIAL4EA0A075B759 164 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 KHDRBS3O75525 346 aaKnown RBP3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ARHGEF15O94989 841 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 RLN2P04090 185 aa3.63□□□□□ -1.83
NEDD4-209ENST00000508871 ATP1A1P05023 1023 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms