RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 TMEM107Q6UX40 140 aa8□□□□□ -1.13
CAST-220ENST00000508117 USP43Q70EL4 1123 aa8□□□□□ -1.13
CAST-220ENST00000508117 GALNT5Q7Z7M9 940 aa8□□□□□ -1.13
CAST-220ENST00000508117 CTAGE3PQ8IX95 158 aa8□□□□□ -1.13
CAST-220ENST00000508117 PPM1NQ8N819 430 aa8□□□□□ -1.13
CAST-220ENST00000508117 SPATA4Q8NEY3 305 aa8□□□□□ -1.13
CAST-220ENST00000508117 B4GALNT2Q8NHY0 566 aa8□□□□□ -1.13
CAST-220ENST00000508117 ZFP90Q8TF47 636 aa8□□□□□ -1.13
CAST-220ENST00000508117 C16orf78Q8WTQ4 265 aa8□□□□□ -1.13
CAST-220ENST00000508117 ZNF75CPQ92670 426 aaPredicted RBP8□□□□□ -1.13
CAST-220ENST00000508117 ELP4Q96EB1 424 aa8□□□□□ -1.13
CAST-220ENST00000508117 MUS81Q96NY9 551 aa8□□□□□ -1.13
CAST-220ENST00000508117 NSUN5Q96P11 429 aaKnown RBP8□□□□□ -1.13
CAST-220ENST00000508117 RBM4Q9BWF3 364 aaKnown RBP8□□□□□ -1.13
CAST-220ENST00000508117 BPESC1Q9GZL8 116 aa8□□□□□ -1.13
CAST-220ENST00000508117 UBQLN4Q9NRR5 601 aa8□□□□□ -1.13
CAST-220ENST00000508117 DDX18Q9NVP1 670 aaKnown RBP8□□□□□ -1.13
CAST-220ENST00000508117 SIRT5Q9NXA8 310 aa8□□□□□ -1.13
CAST-220ENST00000508117 DMGDHQ9UI17 866 aaKnown RBP8□□□□□ -1.13
CAST-220ENST00000508117 FBXO9Q9UK97 447 aaPredicted RBP8□□□□□ -1.13
CAST-220ENST00000508117 ACTL7BQ9Y614 415 aa8□□□□□ -1.13
CAST-220ENST00000508117 GPC6Q9Y625 555 aaPredicted RBP8□□□□□ -1.13
CAST-220ENST00000508117 IGKV3D-15A0A087WSY6 115 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 GNG14A0A1W2PPG7 69 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 GXYLT2A0PJZ3 443 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 TRIM77I1YAP6 450 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 RAD51DO75771 328 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 HSPA4LO95757 839 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 JUNP05412 331 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 RPS17P08708 135 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 RBP1P09455 135 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 EDNRAP25101 427 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 TIA1P31483 386 aaKnown RBP eCLIP7.99□□□□□ -1.13
CAST-220ENST00000508117 LIMS1P48059 325 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 NCBP2P52298 156 aaKnown RBP eCLIP7.99□□□□□ -1.13
CAST-220ENST00000508117 CDH15P55291 814 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 SUMO3P55854 103 aaPredicted RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 SNRPD2P62316 118 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 RASGEF1BQ0VAM2 473 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 FOXF1Q12946 379 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 SELENBP1Q13228 472 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 PDK3Q15120 406 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 C8orf74Q6P047 294 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 MTERF4Q7Z6M4 381 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 ZNF100Q8IYN0 542 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 MMGT1Q8N4V1 131 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 NOA1Q8NC60 698 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 OR6Y1Q8NGX8 325 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 OR52N5Q8NH56 324 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.99□□□□□ -1.13
CAST-220ENST00000508117 ZNF418Q8TF45 676 aaPredicted RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 PHF21BQ96EK2 531 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 C1QTNF3Q9BXJ4 246 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 SAP130Q9H0E3 1048 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 TAS2R16Q9NYV7 291 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 MALT1Q9UDY8 824 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 ZNF225Q9UK10 706 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 WBP11Q9Y2W2 641 aaKnown RBP7.99□□□□□ -1.13
CAST-220ENST00000508117 ZNF281Q9Y2X9 895 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 ATP23Q9Y6H3 246 aa7.99□□□□□ -1.13
CAST-220ENST00000508117 A0A096LPK6 155 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 CIB4A0PJX0 185 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 HMX2A2RU54 273 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 M0R1B8 84 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ETV2O00321 342 aaPredicted RBP7.98□□□□□ -1.13
CAST-220ENST00000508117 PDE5AO76074 875 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 STAMBPO95630 424 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 KRT6AP02538 564 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 KRT6BP04259 564 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 HPGDP15428 266 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 NTSP30990 170 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 STX2P32856 288 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 KRT6CP48668 564 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 PRIM2P49643 509 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 KHKP50053 298 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ARFIP2P53365 341 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 HILS1P60008 231 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 DEFA6Q01524 100 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 CHRNEQ04844 493 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 LGALS3BPQ08380 585 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ACSM2AQ08AH3 577 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 TRADDQ15628 312 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 GABRA6Q16445 453 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 SLC25A53Q5H9E4 307 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 TEX35Q5T0J7 233 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ACSM2BQ68CK6 577 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 C17orf78Q8N4C9 275 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 LRRC17Q8N6Y2 441 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 CDRT4Q8N9R6 151 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 GATSQ8NAP1 163 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 C1orf162Q8NEQ5 155 aaPredicted RBP7.98□□□□□ -1.13
CAST-220ENST00000508117 FBXO27Q8NI29 283 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 GPR151Q8TDV0 419 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ZNF483Q8TF39 744 aaPredicted RBP7.98□□□□□ -1.13
CAST-220ENST00000508117 EDARADDQ8WWZ3 215 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 PIK3R3Q92569 461 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 MRGPRX4Q96LA9 322 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 AMDHD1Q96NU7 426 aa7.98□□□□□ -1.13
CAST-220ENST00000508117 ZNF300Q96RE9 604 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms