RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF275Q9NSD4 429 aaPredicted RBP6.21□□□□□ -1.42
VCAN-207ENST00000507162 AURKAIP1Q9NWT8 199 aaPredicted RBP6.21□□□□□ -1.42
VCAN-207ENST00000507162 NOSIPQ9Y314 301 aaKnown RBP6.21□□□□□ -1.42
VCAN-207ENST00000507162 RNF114Q9Y508 228 aa6.21□□□□□ -1.42
VCAN-207ENST00000507162 SOX21Q9Y651 276 aaPredicted RBP6.21□□□□□ -1.42
VCAN-207ENST00000507162 PLXNB1O43157 2135 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 RYR1P21817 5038 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 IGHV1-18A0A0C4DH31 117 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CLDN34H7C241 214 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CCDC188H7C350 402 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 PIP5K1BO14986 540 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 PIP5K1CO60331 668 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CYTIPO60759 359 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 SKAP2O75563 359 aaPredicted RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 MPIG6BO95866 241 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 NGFP01138 241 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 HPXP02790 462 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 S100BP04271 92 aaPredicted RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 IGFBP1P08833 259 aaPredicted RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 CTAGE8P0CG41 777 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 ACHEP22303 614 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 SLC7A1P30825 629 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 MAPK12P53778 367 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 RAC3P60763 192 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 LCN2P80188 198 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 PRR5P85299 388 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 SLC18A2Q05940 514 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CUL3Q13618 768 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
VCAN-207ENST00000507162 C2orf68Q2NKX9 166 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 GRAMD1BQ3KR37 738 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 SEL1L2Q5TEA6 688 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 GRHL2Q6ISB3 625 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 RAD9BQ6WBX8 426 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CTAGE4Q8IX94 777 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 OR9A2Q8NGT5 310 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CEP70Q8NHQ1 597 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 ZFP90Q8TF47 636 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 YIPF5Q969M3 257 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 MRGPRX4Q96LA9 322 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 SLC38A2Q96QD8 506 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 KLHDC3Q9BQ90 382 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 CD244Q9BZW8 370 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 COQ10BQ9H8M1 238 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 LMBRD1Q9NUN5 540 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 NECAP2Q9NVZ3 263 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 OXSMQ9NWU1 459 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 GAR1Q9NY12 217 aaKnown RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 PLEK2Q9NYT0 353 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 TAS2R9Q9NYW1 312 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 GMPR2Q9P2T1 348 aaKnown RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 UPB1Q9UBR1 384 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 MRTO4Q9UKD2 239 aaKnown RBP6.2□□□□□ -1.42
VCAN-207ENST00000507162 UTS2RQ9UKP6 389 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 TSC22D4Q9Y3Q8 395 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 PCDHGA11Q9Y5H2 935 aa6.2□□□□□ -1.42
VCAN-207ENST00000507162 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 IGHV3OR16-10A0A075B7F0 116 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 C1orf226A1L170 272 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 C7orf72A4D263 438 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 DHHO43323 396 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 GUCY1B2O75343 617 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 MRPL33O75394 65 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 ESRRBO95718 433 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 NUDT14O95848 222 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 MLNP12872 115 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 VAMP1P23763 118 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 GATA3P23771 443 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 CALCRP30988 508 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 EIF1P41567 113 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 MTNR1AP48039 350 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 PIK3CGP48736 1102 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 PSG6Q00889 435 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 TGFBR3Q03167 851 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 COL10A1Q03692 680 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 FOXF1Q12946 379 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 CCNG2Q16589 344 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 SLC9B1Q4ZJI4 515 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 HIKESHIQ53FT3 197 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 ANKRD16Q6P6B7 361 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 BLOC1S3Q6QNY0 202 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 FIP1L1Q6UN15 594 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 R3HCC1LQ7Z5L2 792 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 WDFY1Q8IWB7 410 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 GSPT2Q8IYD1 628 aaKnown RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 AGGF1Q8N302 714 aaeCLIP6.19□□□□□ -1.42
VCAN-207ENST00000507162 TEX9Q8N6V9 391 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 LRRC57Q8N9N7 239 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 RNF214Q8ND24 703 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 OR4F15Q8NGB8 312 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 FBXO27Q8NI29 283 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 ACTRT2Q8TDY3 377 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 RAB8BQ92930 207 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 RAB39BQ96DA2 213 aa6.19□□□□□ -1.42
VCAN-207ENST00000507162 CNRIP1Q96F85 164 aaPredicted RBP6.19□□□□□ -1.42
VCAN-207ENST00000507162 SIGLEC10Q96LC7 697 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms