RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 UBXN8O00124 270 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TM9SF1O15321 606 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ARHGEF9O43307 516 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZSCAN12O43309 604 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PPIHO43447 177 aaKnown RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 DCXO43602 365 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 STX11O75558 287 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 POP4O95707 220 aaKnown RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PGK1P00558 417 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNRPCP09234 159 aaKnown RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 UQCRFS1P1P0C7P4 283 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 CYBAP13498 195 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF10P21506 573 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PTGER3P43115 390 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 UBE2HP62256 183 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 NTHL1P78549 312 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF85Q03923 595 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 HYAL1Q12794 435 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PDK3Q15120 406 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZMYND11Q15326 602 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 SHHQ15465 462 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 CAMK4Q16566 473 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 MAPK6Q16659 721 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLX4IPQ5VYV7 408 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TTC23Q5W5X9 447 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PMF1Q6P1K2 205 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ADAMTSL5Q6ZMM2 481 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 LANCL3Q6ZV70 420 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 CEACAM19Q7Z692 300 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ANKRD37Q7Z713 158 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PARGQ86W56 976 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMEM17Q86X19 198 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ANKFN1Q8N957 763 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 Q8NBF4 154 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 LRRC15Q8TF66 581 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 SSC4DQ8WTU2 575 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 NPRL2Q8WTW4 380 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TAF15Q92804 592 aaKnown RBP eCLIP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 BADQ92934 168 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 DNAJA3Q96EY1 480 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 WBP1Q96G27 269 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 PSKH2Q96QS6 385 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZBTB18Q99592 522 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 CDX2Q99626 313 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 RIOK1Q9BRS2 568 aaKnown RBP2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 CHCHD5Q9BSY4 110 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 OCR1Q9BZK8 76 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC25A51Q9H1U9 297 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 RHOJQ9H4E5 214 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ELOVL3Q9HB03 270 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ABCC13Q9NSE7 274 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 GALPQ9UBC7 116 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 WDR45Q9Y484 360 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 GMPPBQ9Y5P6 360 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 MUC3AQ02505 3323 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF532Q9HCE3 1301 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 MYH13Q9UKX3 1938 aa2.64□□□□□ -1.99
TRAPPC11-205ENST00000506426 TCF20Q9UGU0 1960 aaKnown RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZSCAN5CA6NGD5 496 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM74A7A6NL05 159 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 CCDC169A6NNP5 214 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 A8MXK9 166 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 RAMP1O60894 148 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNNO75324 88 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 FLOT1O75955 427 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 NEBLO76041 1014 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 OPN1LWP04000 364 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGFBP1P08833 259 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 BCKDHAP12694 445 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 CPN1P15169 458 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF44P15621 663 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 HNF1AP20823 631 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 NT5EP21589 574 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 UQCRC2P22695 453 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 PBLDP30039 288 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 OXTRP30559 389 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 MAGEA5P43359 124 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 BRCC3P46736 316 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 SULT1E1P49888 294 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 PLA2G16P53816 162 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 MFAP2P55001 183 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPS6P62753 249 aaKnown RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ACY1Q03154 408 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 CSTF1Q05048 431 aaKnown RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 LY6DQ14210 128 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 MESDQ14696 234 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ATXN7L3Q14CW9 347 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 SIX1Q15475 284 aaPredicted RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 CHI3L2Q15782 390 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 SYPL1Q16563 259 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 KRTAP24-1Q3LI83 254 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 FILIP1LQ4L180 1135 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM74A3Q4VXF1 159 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ACER2Q5QJU3 275 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 CELF3Q5SZQ8 465 aaKnown RBP2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 DCST2Q5T1A1 773 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM182AQ5T1J6 154 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 ATF7IP2Q5U623 682 aa2.63□□□□□ -1.99
TRAPPC11-205ENST00000506426 MFSD14CQ5VZR4 134 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms