RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 P2RX6O15547 441 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 NOS1APO75052 506 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PNMTP11086 282 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 EPHA2P29317 976 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PER3P56645 1201 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 TSPAN31Q12999 210 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PGGHGQ32M88 737 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 KCTD18Q6PI47 426 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 SLC22A16Q86VW1 577 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 UBALD2Q8IYN6 164 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 LRRC17Q8N6Y2 441 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 LCORQ96JN0 433 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 DSN1Q9H410 356 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 WNT16Q9UBV4 365 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 C19orf53Q9UNZ5 99 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 FAM25EA8MYX2 175 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 MMP11P24347 488 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 TACR3P29371 465 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 WNT3P56703 355 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 TAS2R43P59537 309 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 SIDT1Q9NXL6 827 aaKnown RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 KCNE3Q9Y6H6 103 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.31
TCOF1-207ENST00000504761 H2BFMP0C1H6 154 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 FCARP24071 287 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 GDF7Q7Z4P5 450 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ZER1Q7Z7L7 766 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 RIMKLAQ8IXN7 391 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 MEIOBQ8N635 442 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 UCKL1Q9NWZ5 548 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 POMT2Q9UKY4 750 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 SCN5AQ14524 2016 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 H7C1C5 153 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 SOD1P00441 154 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 CDK1P06493 297 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF43P17038 809 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-207ENST00000504761 WNT4P56705 351 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 HSD17B7P56937 341 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 LCN6P62502 163 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ACTC1P68032 377 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ACTA1P68133 377 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 RNASE11Q8TAA1 199 aaKnown RBP13.08□□□□□ -0.32
TCOF1-207ENST00000504761 GDF15Q99988 308 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ASB6Q9NWX5 421 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PIAS2O75928 621 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 NME1P15531 152 aaKnown RBP13.08□□□□□ -0.32
TCOF1-207ENST00000504761 S1PR1P21453 382 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PRPH2P23942 346 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PSMB10P40306 273 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 TCTN3Q6NUS6 607 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PRICKLE2Q7Z3G6 844 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 MMP27Q9H306 513 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 SMOC1Q9H4F8 434 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 ACOT13Q9NPJ3 140 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 SEMA4GQ9NTN9 838 aa13.08□□□□□ -0.32
TCOF1-207ENST00000504761 PCYT1BQ9Y5K3 369 aaPredicted RBP13.08□□□□□ -0.32
TCOF1-207ENST00000504761 SH3PXD2BA1X283 911 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 IDSB3KWA1 339 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 WISP3O95389 354 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 UTS2O95399 124 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF12P17014 697 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 WBP2NLQ6ICG8 309 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 OR14A16Q8NHC5 309 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 STT3BQ8TCJ2 826 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 PDCD10Q9BUL8 212 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 BCL2L14Q9BZR8 327 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 VNN3Q9NY84 501 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 TESQ9UGI8 421 aaKnown RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 ATE1O95260 518 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 GLB1P16278 677 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 PRPS1P60891 318 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 MARCH3Q86UD3 253 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 AKAP14Q86UN6 197 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 GPALPP1Q8IXQ4 340 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 A0A087WUU8 490 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 A6NCN8 305 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 NSA2O95478 260 aaKnown RBP13.07□□□□□ -0.32
TCOF1-207ENST00000504761 PRKAR1BP31321 381 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 AQP2P41181 271 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 SLC6A8P48029 635 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 RAB14P61106 215 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 DMPKQ09013 629 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 LSAMPQ13449 338 aa13.07□□□□□ -0.32
TCOF1-207ENST00000504761 CBFBQ13951 182 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms