RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MMP28Q9H239 520 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LHX5Q9H2C1 402 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 C11orf49Q9H6J7 331 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PELI2Q9HAT8 420 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 AGPAT4Q9NRZ5 378 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 GID8Q9NWU2 228 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ARHGEF17Q96PE2 2063 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MAPK8IP3Q9UPT6 1336 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF732B4DXR9 585 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LMO7DNF2Z398 122 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 FOXS1O43638 330 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 RAMP3O60896 148 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PET100P0DJ07 73 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 S100A12P80511 92 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 KLF5Q13887 457 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ZNHIT3Q15649 155 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 AARS2Q5JTZ9 985 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MEDAGQ5VYS4 303 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 H3F3CQ6NXT2 135 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PAQR6Q6TCH4 344 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 CCDC121Q6ZUS5 278 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 G2E3Q7L622 706 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LNX2Q8N448 690 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LIX1Q8N485 282 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MREGQ8N565 214 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 OR4A4PQ8NGN8 299 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 OR5B3Q8NH48 314 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 FAM222BQ8WU58 562 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 KXD1Q9BQD3 176 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 BDH2Q9BUT1 245 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ANKRD19PQ9H560 264 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MOV10Q9HCE1 1003 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 TESQ9UGI8 421 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 CEACAM4O75871 244 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 NOL4O94818 638 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ANP32DO95626 131 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 OXTP01178 125 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 GCP02774 474 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 HIST1H2AGP0C0S8 130 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PI3P19957 117 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 NR4A1P22736 598 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 SHMT2P34897 504 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 RPL21P46778 160 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ALDH3B2P48448 385 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PLK1P53350 603 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LSM6P62312 80 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 HACD4Q5VWC8 232 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 CLVS1Q8IUQ0 354 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 WDFY1Q8IWB7 410 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 METTL4Q8N3J2 472 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ADAMTS14Q8WXS8 1223 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 HIST1H2ACQ93077 130 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PINX1Q96BK5 328 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MAGIXQ9H6Y5 334 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 SAMSN1Q9NSI8 373 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PLEK2Q9NYT0 353 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 PAIP2BQ9ULR5 123 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 COLEC10Q9Y6Z7 277 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 KBTBD11-OT1A0A1B0GTJ5 212 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 A0A1W2PNV4 684 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 SH2D1BO14796 132 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 GPIP06744 558 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 XRCC1P18887 633 aaPredicted RBP4.65□□□□□ -1.66
NIPBL-204ENST00000504430 CCNE1P24864 410 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 IDH2P48735 452 aaKnown RBP4.65□□□□□ -1.66
NIPBL-204ENST00000504430 PSME3P61289 254 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 SRYQ05066 204 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 CRHR2Q13324 411 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF268Q14587 947 aaPredicted RBP4.65□□□□□ -1.66
NIPBL-204ENST00000504430 DUPD1Q68J44 220 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 RFWD3Q6PCD5 774 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 LANCL3Q6ZV70 420 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 PGAP1Q75T13 922 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 GPALPP1Q8IXQ4 340 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 IQCKQ8N0W5 287 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 ELMOD1Q8N336 334 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 WFIKKN2Q8TEU8 576 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 SORCS1Q8WY21 1168 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 NR4A3Q92570 626 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.65□□□□□ -1.66
NIPBL-204ENST00000504430 Q96MF0 132 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM121Q9BTD3 319 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 UCK2Q9BZX2 261 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 POPDC2Q9HBU9 364 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 A4GALTQ9NPC4 353 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 GSN-AS1Q9NRJ2 163 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 CLN8Q9UBY8 286 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 MRPS28Q9Y2Q9 187 aaKnown RBP4.65□□□□□ -1.66
NIPBL-204ENST00000504430 KCTD3Q9Y597 815 aa4.65□□□□□ -1.66
NIPBL-204ENST00000504430 KCNE1BA0A087WTH5 132 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 RGS16O15492 202 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 SNX3O60493 162 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 IFNA5P01569 189 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 OCMP0CE72 109 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 IRF2P14316 349 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ISL1P61371 349 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 TUBA4AP68366 448 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 DCAF12Q5T6F0 453 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms