RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RNF103-CHMP3A0A140T963 221 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 A0A1W2PPR1 153 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 DEFB108AA8MXU0 73 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 NPIPB9F8W1W9 429 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 CSTAP01040 98 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 YES1P07947 543 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 INHBBP09529 407 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 OR12D1P0DN82 309 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 UBL4AP11441 157 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 PRKCAP17252 672 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 CD53P19397 219 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 CHI3L1P36222 383 aaPredicted RBP10.68□□□□□ -0.7
MED28-203ENST00000503945 CCR4P51679 360 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 CASP9P55211 416 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 NKX6-1P78426 367 aaPredicted RBP10.68□□□□□ -0.7
MED28-203ENST00000503945 FOXF1Q12946 379 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 TOMM34Q15785 309 aaPredicted RBP10.68□□□□□ -0.7
MED28-203ENST00000503945 ZNF141Q15928 474 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 ACKR1Q16570 336 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.68□□□□□ -0.7
MED28-203ENST00000503945 PDZK1Q5T2W1 519 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 ZNF550Q7Z398 422 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 SPATA19Q7Z5L4 167 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 ANKRD46Q86W74 232 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 KRTAP1-3Q8IUG1 177 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 TMCO5AQ8N6Q1 288 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 MIPOL1Q8TD10 442 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 TMEM234Q8WY98 164 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 TESCQ96BS2 214 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 ARSGQ96EG1 525 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 SLC35G5Q96KT7 338 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 THUMPD3Q9BV44 507 aaKnown RBP10.68□□□□□ -0.7
MED28-203ENST00000503945 OR51I1Q9H343 314 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 C12orf49Q9H741 205 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 MEAF6Q9HAF1 191 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 THAP1Q9NVV9 213 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 GPR52Q9Y2T5 361 aa10.68□□□□□ -0.7
MED28-203ENST00000503945 TRPC5OSA6NMA1 111 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 OIP5O43482 229 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 SCN2BO60939 215 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 UGT2B17O75795 530 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 GUSBP08236 651 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 PGCP20142 388 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 ADSLP30566 484 aaPredicted RBP10.67□□□□□ -0.7
MED28-203ENST00000503945 SLC7A1P30825 629 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 RAC3P60763 192 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 PHC1P78364 1004 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 BST1Q10588 318 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 CASP8Q14790 479 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 QPRTQ15274 297 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 NDUFAF6Q330K2 333 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 TIGD2Q4W5G0 525 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 SLC25A53Q5H9E4 307 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 SHEQ5VZ18 495 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 CLEC9AQ6UXN8 241 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 C22orf34Q6ZV56 151 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 FCRLAQ7L513 359 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 P3H2Q8IVL5 708 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 TUSC5Q8IXB3 177 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 TRIML2Q8N7C3 387 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 ANKRD42Q8N9B4 389 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 KLHDC3Q9BQ90 382 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 GP6Q9HCN6 339 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 POLE3Q9NRF9 147 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 HAO1Q9UJM8 370 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 HEATR5AQ86XA9 2040 aa10.67□□□□□ -0.7
MED28-203ENST00000503945 SLCO1B7G3V0H7 640 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ANKRD28O15084 1053 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 HDAC3O15379 428 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SMPD2O60906 423 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 NTN1O95631 604 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 ENPP1P22413 925 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 FKBP2P26885 142 aaKnown RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 SHC1P29353 583 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 AGTR1P30556 359 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 APOBEC1P41238 236 aaKnown RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 ANXA11P50995 505 aaKnown RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 NME5P56597 212 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SESN3P58005 492 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 UFM1P61960 85 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SELENBP1Q13228 472 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ZNF239Q16600 458 aaKnown RBP10.66□□□□□ -0.7
MED28-203ENST00000503945 FAM174BQ3ZCQ3 159 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 GPAT3Q53EU6 434 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 BEX5Q5H9J7 111 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 SPANXN4Q5MJ08 99 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 AP1ARQ63HQ0 302 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ATG16L1Q676U5 607 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 HEPHL1Q6MZM0 1159 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 OGFOD2Q6N063 350 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ZNF621Q6ZSS3 439 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 STEAP2Q8NFT2 490 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ZNF563Q8TA94 476 aa10.66□□□□□ -0.7
MED28-203ENST00000503945 ZFP90Q8TF47 636 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms