RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	SLC25A3	Q00325	362 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	SLC7A5	Q01650	507 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	LCP2	Q13094	533 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	NDUFAF6	Q330K2	333 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	ABLIM2	Q6H8Q1	611 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	ZNF544	Q6NX49	715 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	TIFAB	Q6ZNK6	161 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	SSX8	Q7RTT4	187 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	MTERF4	Q7Z6M4	381 aa	Known RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	MEX3D	Q86XN8	651 aa	Known RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	MUCL1	Q96DR8	90 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	REXO5	Q96IC2	774 aa	Known RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	MUS81	Q96NY9	551 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	PLA2G12A	Q9BZM1	189 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	RAB17	Q9H0T7	212 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	EML4	Q9HC35	981 aa	Known RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	KLHL9	Q9P2J3	617 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	CARD8	Q9Y2G2	431 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	GPC6	Q9Y625	555 aa	Predicted RBP	11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	KCNE3	Q9Y6H6	103 aa		11.11	□□□□□ -0.63
LMNA-218	ENST00000502357	NPIPA5	A0A0B4J1W7	369 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357		A0A1W2PR80	420 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	NPIPA7	E9PJI5	369 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	KIF2A	O00139	706 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	RSL1D1	O76021	490 aa	Known RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	ITGA5	P08648	1049 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	NPIPA8	P0DM63	369 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	ATP5F1	P24539	256 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	ECHS1	P30084	290 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	NR4A2	P43354	598 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	RNF144A	P50876	292 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	PRKAG1	P54619	331 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	SUMO3	P55854	103 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	RASGEF1B	Q0VAM2	473 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	GABRA6	Q16445	453 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	VPS26B	Q4G0F5	336 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	FAM166A	Q6J272	317 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	ZCCHC12	Q6PEW1	402 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	TMEM108	Q6UXF1	575 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	LSR	Q86X29	649 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	CEP70	Q8NHQ1	597 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	CDC26	Q8NHZ8	85 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	MS4A4E	Q96PG1	132 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	INPP5K	Q9BT40	448 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	EMCN	Q9ULC0	261 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	MGAT4B	Q9UQ53	548 aa		11.1	□□□□□ -0.63
LMNA-218	ENST00000502357	LOC100289279	A0A1B0GTE1	492 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	GJE1	A6NN92	205 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357		G3V2L1	256 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	SCD	O00767	359 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PDPK1	O15530	556 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	RAD51D	O75771	328 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	INHBA	P08476	426 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	CSF3	P09919	207 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	DHRS4L1	P0CG22	281 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PYGB	P11216	843 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	CFP	P27918	469 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PHB	P35232	272 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	FABP6	P51161	128 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	ZNF83	P51522	516 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	ETF1	P62495	437 aa	Known RBP	11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	SELENBP1	Q13228	472 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PDK3	Q15120	406 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	ZSWIM7	Q19AV6	140 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	SPDYA	Q5MJ70	313 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	TEX35	Q5T0J7	233 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	FBXW9	Q5XUX1	488 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	SLC22A25	Q6T423	547 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	LRIG3	Q6UXM1	1119 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	FBXL14	Q8N1E6	418 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	ATP6V1C2	Q8NEY4	427 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	OR2T11	Q8NH01	316 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	OR52N5	Q8NH56	324 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	OR2W6P	Q8NHA6	318 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	CDS1	Q92903	461 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	FAM120B	Q96EK7	910 aa	Known RBP	11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	SORCS2	Q96PQ0	1159 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	BTBD2	Q9BX70	525 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PIGU	Q9H490	435 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	CHODL	Q9H9P2	273 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	MID1IP1	Q9NPA3	183 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	DUSP22	Q9NRW4	184 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	GIN1	Q9NXP7	522 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	MALT1	Q9UDY8	824 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	KCNE5	Q9UJ90	142 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	KCNS2	Q9ULS6	477 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	PTGDR2	Q9Y5Y4	395 aa		11.09	□□□□□ -0.63
LMNA-218	ENST00000502357	KCNAB3	O43448	404 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	IGHV3-9	P01782	118 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	HMGN2	P05204	90 aa	Known RBP	11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	ALOX5	P09917	674 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	SDC1	P18827	310 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	GPC1	P35052	558 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	SERPINB4	P48594	390 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	POU6F2	P78424	691 aa	Predicted RBP	11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	GALNT5	Q7Z7M9	940 aa		11.08	□□□□□ -0.64
LMNA-218	ENST00000502357	DEPDC4	Q8N2C3	294 aa		11.08	□□□□□ -0.64

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