RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TMEM185BQ9H7F4 350 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PAQR5Q9NXK6 330 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 SPTBN1Q01082 2364 aaKnown RBP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 A0A0G2JPF8 293 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 A0A0J9YW62 118 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CLDN24A6NM45 220 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 GJE1A6NN92 205 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 EVPLLA8MZ36 301 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 HNRNPCL2B2RXH8 293 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 HNRNPCL3B7ZW38 293 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 TNFSF11O14788 317 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ANGPT2O15123 496 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ADAMDEC1O15204 470 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 EFNA2O43921 213 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 HNRNPCL1O60812 293 aaKnown RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 BCHEP06276 602 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 HNRNPCL4P0DMR1 293 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CD1EP15812 388 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 IL11P20809 199 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 PPIBP23284 216 aaKnown RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ELK4P28324 431 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 UQCRC1P31930 480 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 RYKP34925 604 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 SFTPDP35247 375 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ASCL1P50553 236 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CARD18P57730 90 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 TMEM176BQ3YBM2 270 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 HBMQ6B0K9 141 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CMIPQ8IY22 773 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 GCNT2Q8N0V5 402 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 RELL2Q8NC24 303 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 OR10D3Q8NH80 312 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 OR2V1Q8NHB1 315 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 FNDC9Q8TBE3 224 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 TSPEARQ8WU66 669 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 WDR60Q8WVS4 1066 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ST8SIA1Q92185 356 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 OSTF1Q92882 214 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 KLHL15Q96M94 604 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 SFXN3Q9BWM7 321 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CCDC134Q9H6E4 229 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 CACYBPQ9HB71 228 aaKnown RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 SERINC1Q9NRX5 453 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 SLC25A37Q9NYZ2 338 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 VAPAQ9P0L0 249 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 LEF1Q9UJU2 399 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 MCTS1Q9ULC4 181 aaKnown RBP11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF232Q9UNY5 417 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF175Q9Y473 711 aa11.51□□□□□ -0.57
HSPG2-213ENST00000498495 EEF1E1-BLOC1S5C9J1V9 151 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 C5orf58C9J3I9 102 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 EEF1E1O43324 174 aaKnown RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 CXCL13O43927 109 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 DNAJA2O60884 412 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 SYNGR4O95473 234 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 CRHP06850 196 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 NUDT7P0C024 238 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 SLC6A8P48029 635 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 SESN3P58005 492 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 MAPK11Q15759 364 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 SLC25A53Q5H9E4 307 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 DMRTC2Q8IXT2 367 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 ACBD4Q8NC06 268 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 FAM71CQ8NEG0 241 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 OR52P1PQ8NH57 321 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 CNOT9Q92600 299 aaKnown RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF524Q96C55 264 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 TMEM19Q96HH6 336 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 ADGRG7Q96K78 797 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 TIGARQ9NQ88 270 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 ACER3Q9NUN7 267 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 MRGBPQ9NV56 204 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 FOXD3Q9UJU5 478 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-213ENST00000498495 CORO2BQ9UQ03 480 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 KIAA1549Q9HCM3 1950 aa11.5□□□□□ -0.57
HSPG2-213ENST00000498495 BCAS1O75363 584 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 NTN1O95631 604 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 FCGR2AP12318 317 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 BMP2P12643 396 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 NID1P14543 1247 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 HOXB9P17482 250 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 IGFBP2P18065 325 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 RPS4Y1P22090 263 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 PEX19P40855 299 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 APOBEC1P41238 236 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 IDH2P48735 452 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 MERTKQ12866 999 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 SELENBP1Q13228 472 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 LARS2Q15031 903 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 CTU2Q2VPK5 515 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 RUNDC3AQ59EK9 446 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 GTF2IRD2BQ6EKJ0 949 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms