RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 AARDQ4LEZ3 155 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LINC01554Q52M75 96 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C1orf141Q5JVX7 400 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TTC39AQ5SRH9 613 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CARD17Q5XLA6 110 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SAXO2Q658L1 398 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ICE2Q659A1 982 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SUMO4Q6EEV6 95 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM211Q6ICI0 200 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC27A4Q6P1M0 643 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 BTNL8Q6UX41 500 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LRIG3Q6UXM1 1119 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMPRSS11AQ6ZMR5 421 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 STAC2Q6ZMT1 411 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 UBE2R2Q712K3 238 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 REXO1L1PQ8IX06 675 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FBXO16Q8IX29 292 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 PDZD9Q8IXQ8 264 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C12orf56Q8IXR9 622 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ADGRF3Q8IZF5 1079 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CA13Q8N1Q1 262 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LINC01356Q8N9X3 169 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FBXO27Q8NI29 283 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC22A17Q8WUG5 538 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FAR1Q8WVX9 515 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SARAFQ96BY9 339 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FGGYQ96C11 551 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM41AQ96HV5 264 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RSRC1Q96IZ7 334 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TRNT1Q96Q11 434 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 SERINC2Q96SA4 455 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PDCD1LG2Q9BQ51 273 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SELENOSQ9BQE4 189 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ACAT2Q9BWD1 397 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PAPOLGQ9BWT3 736 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 NMNAT2Q9BZQ4 307 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 B3GNT4Q9C0J1 378 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 OPN3Q9H1Y3 402 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 POPDC3Q9HBV1 291 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 HINT3Q9NQE9 182 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 P4HTMQ9NXG6 502 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GALNT8Q9NY28 637 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 MYOTQ9UBF9 498 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GLS2Q9UI32 602 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PCDHGA9Q9Y5G4 932 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 AP1M2Q9Y6Q5 423 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ATG2BQ96BY7 2078 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 A0A0A6YYH2 397 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 A0A1W2PQM1 296 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MEX3AA1L020 520 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 GTPBP10A4D1E9 387 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 A6NJ64 397 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 H0Y980 276 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GPR171O14626 319 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 B4GALT5O43286 388 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ASNA1O43681 348 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FADS1O60427 444 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 HPGDSO60760 199 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MITFO75030 526 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 SPAG6O75602 509 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC25A14O95258 325 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 CSF1P09603 554 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LINGO3P0C6S8 592 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 IRF2P14316 349 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CTRB1P17538 263 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MST1P26927 711 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 HOXC12P31275 282 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC6A6P31641 620 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MC4RP32245 332 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 KIR2DS4P43632 304 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 UQCRFS1P47985 274 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CLCNKAP51800 687 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CLCNKBP51801 687 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RBM11P57052 281 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 RHBDL3P58872 404 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TAS2R41P59536 307 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PSMC5P62195 406 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TGFBR3Q03167 851 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MESP2Q0VG99 397 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ART3Q13508 389 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 IMPG1Q17R60 797 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 HIGD2BQ4VC39 106 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 KRTCAP3Q53RY4 240 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MIIPQ5JXC2 388 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C9orf50Q5SZB4 431 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SAMD13Q5VXD3 122 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 EEF1DP3Q658K8 133 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CTRB2Q6GPI1 263 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TCEAL6Q6IPX3 200 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LIN54Q6MZP7 749 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RBMS3Q6XE24 437 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 MARK2Q7KZI7 788 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 VTCN1Q7Z7D3 282 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM173Q86WV6 379 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TUSC5Q8IXB3 177 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RIMKLAQ8IXN7 391 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF683Q8IZ20 524 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FAM169BQ8N8A8 192 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TRIML1Q8N9V2 468 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms