RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TMEM234Q8WY98 164 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 UGT2B28Q9BY64 529 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 ZDHHC11Q9H8X9 412 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 MED17Q9NVC6 651 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 TAS2R10Q9NYW0 307 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 VDAC3Q9Y277 283 aa19.76■□□□□ 0.75
C9orf3-222ENST00000496567 TCRBV5S2A0A599 114 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 FMO6PO60774 539 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ADAM11O75078 769 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 PRG2P13727 222 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 HK1P19367 917 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ZNF136P52737 540 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 QPRTQ15274 297 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 GLYR1Q49A26 553 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ENPP6Q6UWR7 440 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 CISD2Q8N5K1 135 aaKnown RBP19.75■□□□□ 0.75
C9orf3-222ENST00000496567 FAM83FQ8NEG4 500 aaPredicted RBP19.75■□□□□ 0.75
C9orf3-222ENST00000496567 OR6T1Q8NGN1 323 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ST8SIA1Q92185 356 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ZBTB8AQ96BR9 441 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ZNF559Q9BR84 538 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 OR2B2Q9GZK3 357 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 ACKR4Q9NPB9 350 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 V9GYQ6 96 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 BSNQ9UPA5 3926 aa19.75■□□□□ 0.75
C9orf3-222ENST00000496567 AP3D1O14617 1153 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 IFNW1P05000 195 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 TNFRSF1BP20333 461 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 OR1E2P47887 323 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 IDH2P48735 452 aaKnown RBP19.74■□□□□ 0.75
C9orf3-222ENST00000496567 PLPPR5Q32ZL2 321 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 SPATA24Q86W54 205 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 LACC1Q8IV20 430 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 OR14L1PQ8NHC6 308 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 KLHDC3Q9BQ90 382 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 WFDC6Q9BQY6 131 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 TRIM2Q9C040 744 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 HEATR5AQ86XA9 2040 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 TTLL8A6PVC2 850 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 ZIC3O60481 467 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 UMPSP11172 480 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 GP1BBP13224 206 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 EIF1P41567 113 aaKnown RBP19.74■□□□□ 0.75
C9orf3-222ENST00000496567 HOXC5Q00444 222 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 TOMM34Q15785 309 aaPredicted RBP19.74■□□□□ 0.75
C9orf3-222ENST00000496567 COLEC12Q5KU26 742 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 WBP2NLQ6ICG8 309 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 FAM86B1Q8N7N1 296 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 OR4D11Q8NGI4 311 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 MCHR1Q99705 422 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 TMEM27Q9HBJ8 222 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 AGPAT4Q9NRZ5 378 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 ACER3Q9NUN7 267 aa19.74■□□□□ 0.75
C9orf3-222ENST00000496567 PCNX3Q9H6A9 2034 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 C7orf72A4D263 438 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 HOXB6P17509 224 aaKnown RBP19.73■□□□□ 0.75
C9orf3-222ENST00000496567 SLC1A3P43003 542 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 NPTX1Q15818 432 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 FAM98BQ52LJ0 330 aaKnown RBP19.73■□□□□ 0.75
C9orf3-222ENST00000496567 CMPK2Q5EBM0 449 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 YRDCQ86U90 279 aaKnown RBP19.73■□□□□ 0.75
C9orf3-222ENST00000496567 RBM45Q8IUH3 476 aaKnown RBP19.73■□□□□ 0.75
C9orf3-222ENST00000496567 SIAH3Q8IW03 269 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 LSMEM1Q8N8F7 131 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 FAR1Q8WVX9 515 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 SNRNP40Q96DI7 357 aaKnown RBP19.73■□□□□ 0.75
C9orf3-222ENST00000496567 SLC47A1Q96FL8 570 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 MRGPRX4Q96LA9 322 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 PIGQQ9BRB3 760 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 DEFB127Q9H1M4 99 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 MAGIXQ9H6Y5 334 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 RPS6KB2Q9UBS0 482 aa19.73■□□□□ 0.75
C9orf3-222ENST00000496567 NPIPA5E9PKD4 350 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 ETV2O00321 342 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 GPIP06744 558 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 CELA3AP09093 270 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 PRKCAP17252 672 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 ADH6P28332 368 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 GCKP35557 465 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 HTR3AP46098 478 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 SESN3P58005 492 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 CHRNB3Q05901 458 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 SLC25A53Q5H9E4 307 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 WIPI1Q5MNZ9 446 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 RAET1LQ5VY80 246 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 DEF8Q6ZN54 512 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 CADM2Q8N3J6 435 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 NR4A3Q92570 626 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 SEPHS2Q99611 448 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 AMBRA1Q9C0C7 1298 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 POLR2J2Q9GZM3 115 aaKnown RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 POLR2J3Q9H1A7 115 aaKnown RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 LDAHQ9H6V9 325 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 NPIPA1Q9UND3 350 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 NTNG1Q9Y2I2 539 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 RPH3AQ9Y2J0 694 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 KMT2BQ9UMN6 2715 aaPredicted RBP19.72■□□□□ 0.75
C9orf3-222ENST00000496567 ATRXP46100 2492 aa19.72■□□□□ 0.75
C9orf3-222ENST00000496567 NCKAP5O14513 1909 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms