RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MIPOL1Q8TD10 442 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ABHD3Q8WU67 409 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 OR51I1Q9H343 314 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 C12orf49Q9H741 205 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 GLRX2Q9NS18 164 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ZANQ9Y493 2812 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 DSCAMO60469 2012 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 SERINC4A6NH21 518 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 GTPBP1O00178 669 aaKnown RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 KIAA0513O60268 411 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 EIF4E2O60573 245 aaKnown RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 DNAJA2O60884 412 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 UGT2B17O75795 530 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 AK1P00568 194 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 OR12D1P0DN82 309 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 HOXC12P31275 282 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 CCR4P51679 360 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 CARD18P57730 90 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 SELENBP1Q13228 472 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 STX3Q13277 289 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 CBFBQ13951 182 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 CASP8Q14790 479 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 QPRTQ15274 297 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 GPR68Q15743 365 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 MAPK14Q16539 360 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 SAXO2Q658L1 398 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 TYW3Q6IPR3 259 aaKnown RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 ZFP90Q8TF47 636 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 CPNE4Q96A23 557 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 TEX37Q96LM6 180 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 KCNK9Q9NPC2 374 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
VTI1A-209ENST00000496445 MKLN1Q9UL63 735 aa12.73□□□□□ -0.37
VTI1A-209ENST00000496445 ROS1P08922 2347 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 UQCRHLA0A096LP55 91 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 PRSS51A0A1B0GVH4 220 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 DUXAA6NLW8 204 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 C9JVG2 144 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 E9PBE3 544 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 SDHDO14521 159 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 STX11O75558 287 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 H6PDO95479 791 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 CPSF4O95639 269 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 LBPP18428 481 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 UQCRC2P22695 453 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 IL12AP29459 219 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 CLNS1AP54105 237 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 NME5P56597 212 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 PLAURQ03405 335 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 FAM174BQ3ZCQ3 159 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 OGFOD2Q6N063 350 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 TNFAIP8L2Q6P589 184 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 C16orf62Q7Z3J2 963 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 NUFIP2Q7Z417 695 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 ANKRD42Q8N9B4 389 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 FAM71CQ8NEG0 241 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 ATP6V1C2Q8NEY4 427 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 TOR1AIP2Q8NFQ8 470 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 RAB8BQ92930 207 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 NEURL3Q96EH8 262 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 PAIP2Q9BPZ3 127 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 LAT2Q9GZY6 243 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 QRSL1Q9H0R6 528 aaKnown RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 KLHL13Q9P2N7 655 aa12.72□□□□□ -0.37
VTI1A-209ENST00000496445 ING1Q9UK53 422 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-209ENST00000496445 ARID1AO14497 2285 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 IGHV3-15A0A0B4J1V0 119 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 GJE1A6NN92 205 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 KLF4O43474 513 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 SNNO75324 88 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 GCM2O75603 506 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 CSTAP01040 98 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 PPP3CBP16298 524 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 ENPP1P22413 925 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 PGM1P36871 562 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 UFM1P61960 85 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 ACKR1Q16570 336 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 DPY19L1Q2PZI1 675 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 ANXA8L1Q5VT79 327 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 BEND4Q6ZU67 534 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms