RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TIGARQ9NQ88 270 aa14.78□□□□□ -0.04
SF3A1-209ENST00000496189 ICAM5Q9UMF0 924 aa14.78□□□□□ -0.04
SF3A1-209ENST00000496189 NKX2-6A6NCS4 301 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 B4DXG7 233 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 FBP2O00757 339 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 EIF1AYO14602 144 aaKnown RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 C1QCP02747 245 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 BCHEP06276 602 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 DBIP07108 87 aaKnown RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 BMP2P12643 396 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 GPX2P18283 190 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 GRNP28799 593 aaKnown RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 PEX19P40855 299 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 CHRNEQ04844 493 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 FGFBP1Q14512 234 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 ZNF787Q6DD87 383 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 CBLN3Q6UW01 205 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 CMIPQ8IY22 773 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 ANKFN1Q8N957 763 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 CCDC197Q8NCU1 140 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 ZNF563Q8TA94 476 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 WDR60Q8WVS4 1066 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 MARVELD3Q96A59 401 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 LRRC58Q96CX6 371 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 REXO5Q96IC2 774 aaKnown RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 MRGPRX4Q96LA9 322 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 CPPED1Q9BRF8 314 aaPredicted RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 PINK1Q9BXM7 581 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 EFCAB1Q9HAE3 211 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 A4GALTQ9NPC4 353 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 SERINC1Q9NRX5 453 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 MCTS1Q9ULC4 181 aaKnown RBP14.77□□□□□ -0.05
SF3A1-209ENST00000496189 L3MBTL1Q9Y468 752 aa14.77□□□□□ -0.05
SF3A1-209ENST00000496189 ARHGAP21Q5T5U3 1957 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 A0A0G2JPF8 293 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 HNRNPCL2B2RXH8 293 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 HNRNPCL3B7ZW38 293 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SHISA8B8ZZ34 492 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 HNRNPCL1O60812 293 aaKnown RBP14.76□□□□□ -0.05
SF3A1-209ENST00000496189 RCBTB2O95199 551 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SYNGR4O95473 234 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 TFPTP0C1Z6 253 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 LINGO3P0C6S8 592 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 HNRNPCL4P0DMR1 293 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 PRDX6P30041 224 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 EIF1AXP47813 144 aaKnown RBP14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SLC6A8P48029 635 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ASCL1P50553 236 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 CLDN15P56746 228 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 KCNJ10P78508 379 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 FUT5Q11128 374 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 FOXF1Q12946 379 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SKP2Q13309 424 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 CDSNQ15517 529 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 TMEM44Q2T9K0 475 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 PRAMEF8Q5VWM4 474 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 PRAMEF7Q5VXH5 474 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ESPNLQ6ZVH7 1005 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SEM1Q6ZVN7 128 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ADGRE4PQ86SQ3 457 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 POU5F2Q8N7G0 328 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 FBXO27Q8NI29 283 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 GPR119Q8TDV5 335 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SLC38A5Q8WUX1 472 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ST8SIA1Q92185 356 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ARSGQ96EG1 525 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SFXN3Q9BWM7 321 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 UCK2Q9BZX2 261 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 CLCF1Q9UBD9 225 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ZNF232Q9UNY5 417 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 ZNF175Q9Y473 711 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 SPIN1Q9Y657 262 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-209ENST00000496189 PCNX1Q96RV3 2341 aa14.76□□□□□ -0.05
SF3A1-209ENST00000496189 PRAMEF27A3QJZ7 478 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 AGAP5A6NIR3 686 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 EEF1E1-BLOC1S5C9J1V9 151 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 EEF1E1O43324 174 aaKnown RBP14.75□□□□□ -0.05
SF3A1-209ENST00000496189 TOXO94900 526 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 IL18BPO95998 194 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 CRHP06850 196 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 CHRM4P08173 479 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 SLC6A2P23975 617 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 SLC7A1P30825 629 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 CLDN20P56880 219 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 SELENBP1Q13228 472 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 CAPRIN1Q14444 709 aaKnown RBP14.75□□□□□ -0.05
SF3A1-209ENST00000496189 LARS2Q15031 903 aaKnown RBP14.75□□□□□ -0.05
SF3A1-209ENST00000496189 QPRTQ15274 297 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 CYP51A1Q16850 503 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 ZSWIM7Q19AV6 140 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 NDUFAF6Q330K2 333 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 LIN52Q52LA3 116 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 HBMQ6B0K9 141 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 MEX3BQ6ZN04 569 aaKnown RBP14.75□□□□□ -0.05
SF3A1-209ENST00000496189 OLIG3Q7RTU3 272 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 ZNF440Q8IYI8 595 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 LILRA2Q8N149 483 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 C9orf106Q8NAJ2 232 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 OR8J3Q8NGG0 315 aa14.75□□□□□ -0.05
SF3A1-209ENST00000496189 BBS10Q8TAM1 723 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms