RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PDE5AO76074 875 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 CPMP14384 443 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 FPR2P25090 351 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 XKP51811 444 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 RAB1AP62820 205 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 PSPHP78330 225 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 CDK16Q00536 496 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 IRF8Q02556 426 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 SNX1Q13596 522 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 DDX39BQ13838 428 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 HSP90AA5PQ58FG0 334 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 C4orf22Q6V702 233 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 C17orf107Q6ZR85 190 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 MNS1Q8NEH6 495 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 OR4K14Q8NGD5 310 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 RNF138Q8WVD3 245 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 WDR34Q96EX3 536 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 ADGRG7Q96K78 797 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 FAM107BQ9H098 131 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 CNOT10Q9H9A5 744 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 SLC17A6Q9P2U8 582 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 RRP15Q9Y3B9 282 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 ASB4Q9Y574 426 aa8.38□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZCWPW2A0A1B0GU75 182 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 CIB4A0PJX0 185 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 MAGEB16A2A368 324 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 NCF1BA6NI72 391 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 NCF1CA8MVU1 366 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PLPP1O14494 284 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TIMM23O14925 209 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 GMFGO60234 142 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TMPRSS11DO60235 418 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 DOK2O60496 412 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRAMEF4O60810 478 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 RAD51DO75771 328 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PGM3O95394 542 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 OPN1LWP04000 364 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 YES1P07947 543 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 FAM58BPP0C7Q3 252 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 NCF1P14598 390 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PORP16435 677 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 COX5AP20674 150 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 S1PR1P21453 382 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 IGHV1-2P23083 117 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRTN3P24158 256 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 CLK3P49761 638 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 IDH3GP51553 393 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PNLIPRP2P54317 469 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 CHIT1Q13231 466 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 ZNF239Q16600 458 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PDK4Q16654 411 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 MST1LQ2TV78 715 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 ARL13AQ5H913 290 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 SH2D4BQ5SQS7 431 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRAMEF9Q5VWM5 478 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 MED27Q6P2C8 311 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 Q6ZPA2 131 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 C1QL2Q7Z5L3 287 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 ADAMTSL2Q86TH1 951 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TCAIMQ8N3R3 496 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 RNF10Q8N5U6 811 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 C2CD4AQ8NCU7 369 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 NANPQ8TBE9 248 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 WDR60Q8WVS4 1066 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 NEU4Q8WWR8 484 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 EFHD2Q96C19 240 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PDLIM5Q96HC4 596 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 DUX5Q96PT3 197 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TMEM185BQ9H7F4 350 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TIGARQ9NQ88 270 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 ACSS1Q9NUB1 689 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PDP1Q9P0J1 537 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 PRSS50Q9UI38 385 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 C19orf53Q9UNZ5 99 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 TFR2Q9UP52 801 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 MOKQ9UQ07 419 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 VDAC3Q9Y277 283 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 RYR2Q92736 4967 aa8.37□□□□□ -1.07
SMARCAL1-213ENST00000496037 A0A0A6YYD5 115 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 GOLGA6L10A6NI86 522 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SDR42E2A6NKP2 422 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 ATP6V1G2-DDX39BF2Z307 99 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 PGRMC2O15173 223 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 SLC16A6O15403 523 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 CLDN9O95484 217 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 TFP02787 698 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 CCDC175P0C221 793 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 MDKP21741 143 aaPredicted RBP8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 OR3A2P47893 321 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 KHKP50053 298 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 PPOXP50336 477 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 ARFIP1P53367 373 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 PGGT1BP53609 377 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 CARD18P57730 90 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 POU4F1Q01851 419 aa8.36□□□□□ -1.07
SMARCAL1-213ENST00000496037 DUSP2Q05923 314 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms