RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	SLC25A53	Q5H9E4	307 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	OR2A2	Q6IF42	318 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	POMZP3	Q6PJE2	187 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	UBQLNL	Q8IYU4	475 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	METTL25	Q8N6Q8	603 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	ANKFN1	Q8N957	763 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	C9orf106	Q8NAJ2	232 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	NAXE	Q8NCW5	288 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	FAM71C	Q8NEG0	241 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	PNPT1	Q8TCS8	783 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZG16B	Q96DA0	208 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	LRRC46	Q96FV0	321 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	MRGPRX4	Q96LA9	322 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	RNF145	Q96MT1	663 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	TREX2	Q9BQ50	279 aa	Predicted RBP	11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC38A1	Q9H2H9	487 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	EXOSC3	Q9NQT5	275 aa	Known RBP	11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	FGFR1OP2	Q9NVK5	253 aa		11.14	□□□□□ -0.63
MRPL55-233	ENST00000495899	CENPE	Q02224	2701 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CENPVL1	A0A0U1RR11	272 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMEM247	A6NEH6	219 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC22A20	A6NK97	555 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	GJE1	A6NN92	205 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	FAM90A27P	A6NNH2	459 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	C19orf84	I3L1E1	186 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	SYT5	O00445	386 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	NTN1	O95631	604 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	DBI	P07108	87 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CHRM4	P08173	479 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	BMP2	P12643	396 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ETFA	P13804	333 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PRKCA	P17252	672 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	IGFBP2	P18065	325 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PGC	P20142	388 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PEX19	P40855	299 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZNF136	P52737	540 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CRISP3	P54108	245 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CLDN20	P56880	219 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	DSTN	P60981	165 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ZSWIM7	Q19AV6	140 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	FBXL19-AS1	Q494R0	122 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	GTDC1	Q4AE62	458 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PAGE3	Q5JUK9	113 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PDSS1	Q5T2R2	415 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PRAMEF8	Q5VWM4	474 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	PRAMEF7	Q5VXH5	474 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CRYBG3	Q68DQ2	2970 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ESPNL	Q6ZVH7	1005 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	OLIG3	Q7RTU3	272 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	GGN	Q86UU5	652 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	GRAMD2A	Q8IUY3	354 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	LILRA2	Q8N149	483 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	POC1B	Q8TC44	478 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC38A5	Q8WUX1	472 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMEM234	Q8WY98	164 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ST8SIA1	Q92185	356 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	AURKB	Q96GD4	344 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	THUMPD3	Q9BV44	507 aa	Known RBP	11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	SFXN3	Q9BWM7	321 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	TMEM120A	Q9BXJ8	343 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	A4GALT	Q9NPC4	353 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC25A37	Q9NYZ2	338 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	CORO2B	Q9UQ03	480 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	NDUFAF1	Q9Y375	327 aa		11.13	□□□□□ -0.63
MRPL55-233	ENST00000495899	ADGRG4	Q8IZF6	3080 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	DSPP	Q9NZW4	1301 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899		A0A0G2JPF8	293 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	HNRNPCL2	B2RXH8	293 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	HNRNPCL3	B7ZW38	293 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SHISA8	B8ZZ34	492 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899		H0YC42	278 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	EIF1AY	O14602	144 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SEC14L5	O43304	696 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	HNRNPCL1	O60812	293 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TGM6	O95932	706 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SNRPB2	P08579	225 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	UBTFL6	P0CB48	400 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	HNRNPCL4	P0DMR1	293 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	FCGR2A	P12318	317 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	NID1	P14543	1247 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	IL7R	P16871	459 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	BMP5	P22003	454 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	RPS4Y1	P22090	263 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SLC6A8	P48029	635 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	ASCL1	P50553	236 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	RNF144A	P50876	292 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	ARFIP2	P53365	341 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TPD52	P55327	224 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	DLX5	P56178	289 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	FOXF1	Q12946	379 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	QPRT	Q15274	297 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	MAPK11	Q15759	364 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	TOMM34	Q15785	309 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	SGCB	Q16585	318 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	NDUFAF6	Q330K2	333 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	P4HA3	Q7Z4N8	544 aa		11.12	□□□□□ -0.63
MRPL55-233	ENST00000495899	PEX5L	Q8IYB4	626 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms