RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 POLE3Q9NRF9 147 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 SCML2Q9UQR0 700 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 MAB21L2Q9Y586 359 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 USP16Q9Y5T5 823 aa3.32□□□□□ -1.88
NCKAP1-208ENST00000495619 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 ERICH4A6NGS2 130 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CPLX1O14810 134 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 ZNF264O43296 627 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 EFNA2O43921 213 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 DFNA5O60443 496 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 AKR7A3O95154 331 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 TOP1P11387 765 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 ANXA3P12429 323 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 SERPINA2P20848 420 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 HTR2AP28223 471 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 HTR1EP28566 365 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 EPHX2P34913 555 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 STARP49675 285 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 NAPAP54920 295 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 IFT88Q13099 833 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 KCTD19Q17RG1 926 aaPredicted RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CYB5R2Q6BCY4 276 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 WDR74Q6RFH5 385 aaPredicted RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CBLN3Q6UW01 205 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 IL34Q6ZMJ4 242 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 C17orf82Q86X59 251 aaPredicted RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 FBXO30Q8TB52 745 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 C7orf33Q8WU49 177 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 SRSF12Q8WXF0 261 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 HPDLQ96IR7 371 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CITED1Q99966 193 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 NANSQ9NR45 359 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 RDH8Q9NYR8 311 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 XPO7Q9UIA9 1087 aaKnown RBP3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CHMP2BQ9UQN3 213 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 PLLPQ9Y342 182 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 CACNG2Q9Y698 323 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 U3KQV3 271 aa3.31□□□□□ -1.88
NCKAP1-208ENST00000495619 ATP8B3O60423 1300 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 FAM74A7A6NL05 159 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 JAK2O60674 1132 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 SCGB2A1O75556 95 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 CLUP10909 449 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 TNNI3P19429 210 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 CYP2F1P24903 491 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 HTR1FP30939 366 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 NTHL1P78549 312 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 FAM74A3Q4VXF1 159 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 HSP90B2PQ58FF3 399 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 ERASQ7Z444 233 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 H1FOOQ8IZA3 346 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 OR2T33Q8NG76 320 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 N4BP2L2Q92802 583 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 DCAF16Q9NXF7 216 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 MRPL39Q9NYK5 338 aaKnown RBP3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 WRAP73Q9P2S5 460 aaPredicted RBP3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 BTNL2Q9UIR0 455 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 UBQLN1Q9UMX0 589 aaKnown RBP3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 MFHAS1Q9Y4C4 1052 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 SPACA6W5XKT8 324 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 CHD4Q14839 1912 aa3.3□□□□□ -1.88
NCKAP1-208ENST00000495619 RGSL1A5PLK6 1076 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 B3GALNT1O75752 331 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 B3GAT3O94766 335 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 IGHV3-48P01763 117 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 IGF1P05019 195 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 LIM2P55344 173 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 TMED1Q13445 227 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ARFRP1Q13795 201 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ATXN7L3Q14CW9 347 aaPredicted RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ASPHD2Q6ICH7 369 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 C16orf87Q6PH81 154 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ARCQ7LC44 396 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 NRMQ8IXM6 262 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 TEX9Q8N6V9 391 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ZNF433Q8N7K0 673 aaPredicted RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 NANPQ8TBE9 248 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 BLOC1S5Q8TDH9 187 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 SLC5A11Q8WWX8 675 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 OR1E3Q8WZA6 343 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 DHX33Q9H6R0 707 aaKnown RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 TBK1Q9UHD2 729 aa3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 PRPF19Q9UMS4 504 aaKnown RBP3.29□□□□□ -1.88
NCKAP1-208ENST00000495619 ATP10DQ9P241 1426 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 OR6C65A6NJZ3 312 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 CLDN5O00501 218 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 MPHOSPH10O00566 681 aaKnown RBP3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 SNAPINO95295 136 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 DIRAS3O95661 229 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 AK1P00568 194 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 NMT1P30419 496 aaKnown RBP3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 MDH1P40925 334 aaKnown RBP3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 CD151P48509 253 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 CSNK1DP48730 415 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 PPOXP50336 477 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 PLK1P53350 603 aa3.28□□□□□ -1.88
NCKAP1-208ENST00000495619 RGS1Q08116 209 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms