RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 ERICH5Q6P6B1 374 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 ZNF836Q6ZNA1 936 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 ZNF550Q7Z398 422 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 ULK2Q8IYT8 1036 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 GTPBP8Q8N3Z3 284 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 FAM71CQ8NEG0 241 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 BHLHE22Q8NFJ8 381 aaPredicted RBP10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 SSC4DQ8WTU2 575 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 ST8SIA1Q92185 356 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 CNOT9Q92600 299 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 WDYHV1Q96HA8 205 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 MRGPRX4Q96LA9 322 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 KLHL28Q9NXS3 571 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 COQ3Q9NZJ6 369 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 TAGLN3Q9UI15 199 aa10.93□□□□□ -0.66
CSNK1E-213ENST00000495232 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 SEC14L5O43304 696 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 GP1BBP13224 206 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 ZNF708P17019 499 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 PRKCAP17252 672 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 IDH2P48735 452 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 RPS3AP61247 264 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 COPZ1P61923 177 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 MXRA7P84157 204 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 PMPCAQ10713 525 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 FOXF1Q12946 379 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 TOMM34Q15785 309 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 VMACQ2NL98 169 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 RPTNQ6XPR3 784 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 HACD2Q6Y1H2 254 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 NET1Q7Z628 596 aaPredicted RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 PATL1Q86TB9 770 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 PTOV1Q86YD1 416 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 ARMC8Q8IUR7 673 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 GRAMD2AQ8IUY3 354 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 ZZZ3Q8IYH5 903 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 OR10Q1Q8NGQ4 319 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 FBXO27Q8NI29 283 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 ZPLD1Q8TCW7 415 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 PHF10Q8WUB8 498 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 CCDC120Q96HB5 630 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 REXO5Q96IC2 774 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 TRIB1Q96RU8 372 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 SERINC1Q9NRX5 453 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 RLIMQ9NVW2 624 aa10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 DNAJB12Q9NXW2 375 aaKnown RBP10.92□□□□□ -0.66
CSNK1E-213ENST00000495232 GJE1A6NN92 205 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 EIF1AYO14602 144 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 ZG16O60844 167 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 ELK4P28324 431 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PRKAR1BP31321 381 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PCGF2P35227 344 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 HTR3AP46098 478 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 CPA2P48052 419 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 CLDN18P56856 261 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 SESN3P58005 492 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 RAC1P63000 192 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 EEF1A1P68104 462 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 MERTKQ12866 999 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 SGCBQ16585 318 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 TMEM44Q2T9K0 475 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 ACSF3Q4G176 576 aaPredicted RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PDSS1Q5T2R2 415 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 FAM91A1Q658Y4 838 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 POMZP3Q6PJE2 187 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 LACC1Q8IV20 430 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 LILRA2Q8N149 483 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 FITM2Q8N6M3 262 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 ATP6V1C2Q8NEY4 427 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 OR2T12Q8NG77 320 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 RASSF5Q8WWW0 418 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 RND1Q92730 232 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 GPATCH1Q9BRR8 931 aaKnown RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PINK1Q9BXM7 581 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 TMEM185BQ9H7F4 350 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 ACER3Q9NUN7 267 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PAQR5Q9NXK6 330 aaPredicted RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 SPIN1Q9Y657 262 aaPredicted RBP10.91□□□□□ -0.66
CSNK1E-213ENST00000495232 MYO7BQ6PIF6 2116 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 ELOVL7A1L3X0 281 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 CCT8L1PA6NM43 557 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 FAM220BPB1ANY3 271 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 M0QX08 132 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 GSTA4O15217 222 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 DNAJA2O60884 412 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 BCAS1O75363 584 aaPredicted RBP10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 EPPINO95925 133 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 LDLRP01130 860 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 IFNA14P01570 189 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 IL2RAP01589 272 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 GKN3PP0CG01 181 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC7A1P30825 629 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SFTPDP35247 375 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms