RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CADM2Q8N3J6 435 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 MARVELD2Q8N4S9 558 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 CCDC120Q96HB5 630 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 TRIB1Q96RU8 372 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SH3GL1Q99961 368 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 GPATCH1Q9BRR8 931 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 BCL2L10Q9HD36 194 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 SUCOQ9UBS9 1254 aaKnown RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 SLC5A6Q9Y289 635 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 FAM215AQ9Y5M1 114 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 GMEB1Q9Y692 573 aa10.05□□□□□ -0.8
APTX-230ENST00000494649 USP9XQ93008 2570 aaPredicted RBP10.05□□□□□ -0.8
APTX-230ENST00000494649 PCNX1Q96RV3 2341 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 OR14I1A6ND48 311 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 EIF1AYO14602 144 aaKnown RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 BCKDKO14874 412 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 EFNA2O43921 213 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 EIF4E2O60573 245 aaKnown RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 EPPINO95925 133 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 NPPAP01160 153 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 PTNP21246 168 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ACVR2AP27037 513 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 GCKP35557 465 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 CLDN15P56746 228 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 CLDN18P56856 261 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 SESN3P58005 492 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 PMPCAQ10713 525 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 FOXD4Q12950 439 aaPredicted RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 LRRC23Q53EV4 343 aaPredicted RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 RTL6Q6ICC9 239 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ENPP6Q6UWR7 440 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ARMC8Q8IUR7 673 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ULK2Q8IYT8 1036 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 FAM71CQ8NEG0 241 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 OR2T12Q8NG77 320 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ZNF845Q96IR2 970 aaPredicted RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 TUBA1CQ9BQE3 449 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 CTPS2Q9NRF8 586 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 ZNF232Q9UNY5 417 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 MEMO1Q9Y316 297 aa10.04□□□□□ -0.8
APTX-230ENST00000494649 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
APTX-230ENST00000494649 A1L4Q6 167 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 CFAP73A6NFT4 308 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 FIGNL2A6NMB9 653 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 GUSBP08236 651 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 NCK1P16333 377 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 TNFRSF1BP20333 461 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 PRDX6P30041 224 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 ADH7P40394 386 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 AGFG1P52594 562 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 CRYBA2P53672 197 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 MERTKQ12866 999 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 DUSP7Q16829 419 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 NET1Q7Z628 596 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 CALHM3Q86XJ0 350 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 KRT73Q86Y46 540 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 LILRA2Q8N149 483 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 VANGL1Q8TAA9 524 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 SLC26A7Q8TE54 656 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 FIG4Q92562 907 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 TAMM41Q96BW9 452 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 REXO5Q96IC2 774 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 ZNF607Q96SK3 696 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 TP63Q9H3D4 680 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 ALG2Q9H553 416 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 EGFL7Q9UHF1 273 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 M0R3H8 397 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 TNFSF11O14788 317 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 MFN2O95140 757 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 ACTL6AO96019 429 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 ETS2P15036 469 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 ZNF708P17019 499 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 PGCP20142 388 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 PSMA4P25789 261 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 PCGF2P35227 344 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 EIF1AXP47813 144 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 PCBP3P57721 371 aaKnown RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 CDSNQ15517 529 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 CCDC71Q8IV32 467 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 GTPBP8Q8N3Z3 284 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 FAM26EQ8N5C1 309 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 ZBTB8AQ96BR9 441 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 HOPXQ9BPY8 73 aaPredicted RBP10.03□□□□□ -0.8
APTX-230ENST00000494649 PINK1Q9BXM7 581 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 PRDM14Q9GZV8 571 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 IFT52Q9Y366 437 aa10.03□□□□□ -0.8
APTX-230ENST00000494649 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 A0A1B0GUH1 482 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 A0A1W2PNR3 127 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 ELOVL7A1L3X0 281 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 CLCA1A8K7I4 914 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 FAM220BPB1ANY3 271 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 B2RBV5 119 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SERPINB7O75635 380 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 THBS1P07996 1170 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms