RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 OLIG3Q7RTU3 272 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 GDF7Q7Z4P5 450 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 KIF18BQ86Y91 864 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 FUNDC1Q8IVP5 155 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 DMRTC2Q8IXT2 367 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CMIPQ8IY22 773 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 METTL25Q8N6Q8 603 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ANKFN1Q8N957 763 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ACBD4Q8NC06 268 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 RELL2Q8NC24 303 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ATP6V1C2Q8NEY4 427 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF563Q8TA94 476 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 POC1BQ8TC44 478 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 FIG4Q92562 907 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 OSTF1Q92882 214 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 RNASE6Q93091 150 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ZG16BQ96DA0 208 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 SPDL1Q96EA4 605 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 C14orf79Q96F83 325 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 REXO5Q96IC2 774 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ZNF845Q96IR2 970 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 TREX2Q9BQ50 279 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PAIP1Q9H074 479 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 ARMC7Q9H6L4 198 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 CACYBPQ9HB71 228 aaKnown RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 NPDC1Q9NQX5 325 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-207ENST00000493648 SLC6A13Q9NSD5 602 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 MRGBPQ9NV56 204 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 P2RX2Q9UBL9 471 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PRDM4Q9UKN5 801 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 NDUFAF1Q9Y375 327 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 L3MBTL1Q9Y468 752 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 PCDHB14Q9Y5E9 798 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 MED12LQ86YW9 2145 aa6.28□□□□□ -1.4
TOP3A-207ENST00000493648 KIAA1549Q9HCM3 1950 aa6.27□□□□□ -1.4
TOP3A-207ENST00000493648 INTS1Q8N201 2190 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 HEATR5AQ86XA9 2040 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 A0A0G2JPF8 293 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 A0A0J9YW62 118 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 A0A1W2PNV4 684 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 A0A1W2PP18 115 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 EVPLLA8MZ36 301 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 HNRNPCL2B2RXH8 293 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 HNRNPCL3B7ZW38 293 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 EEF1E1-BLOC1S5C9J1V9 151 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 C5orf58C9J3I9 102 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 TNFSF11O14788 317 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ADAMDEC1O15204 470 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 EEF1E1O43324 174 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 CXCL13O43927 109 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 HNRNPCL1O60812 293 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 DNAJA2O60884 412 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PLGP00747 810 aaPredicted RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 C1QCP02747 245 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 OPN1LWP04000 364 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 CHRM4P08173 479 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PABPC4LP0CB38 370 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 HNRNPCL4P0DMR1 293 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ETFAP13804 333 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 IL11P20809 199 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FKBP2P26885 142 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 RYKP34925 604 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SFTPDP35247 375 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 APOBEC1P41238 236 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 KIR2DL3P43628 341 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SLC6A8P48029 635 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ARFIP2P53365 341 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 MVDP53602 400 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FUT5Q11128 374 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FOXF1Q12946 379 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FADDQ13158 208 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 MYBPHQ13203 477 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SKP2Q13309 424 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 LARS2Q15031 903 aaKnown RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 RGNQ15493 299 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ZSWIM7Q19AV6 140 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 TMEM176BQ3YBM2 270 aaPredicted RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FBXL19-AS1Q494R0 122 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 GTDC1Q4AE62 458 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SLC25A53Q5H9E4 307 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 LRIF1Q5T3J3 769 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 LUZP2Q86TE4 346 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 GGNQ86UU5 652 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 PEX5LQ8IYB4 626 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF440Q8IYI8 595 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 ZNF295-AS1Q8N0V1 137 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 GCNT2Q8N0V5 402 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 CNEP1R1Q8N9A8 125 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 OR10D3Q8NH80 312 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 OR2V1Q8NHB1 315 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 FNDC9Q8TBE3 224 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 TSPEARQ8WU66 669 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 SLC38A5Q8WUX1 472 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 WDR60Q8WVS4 1066 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 AURKBQ96GD4 344 aaPredicted RBP6.27□□□□□ -1.41
TOP3A-207ENST00000493648 KLHL15Q96M94 604 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 NPAS1Q99742 590 aa6.27□□□□□ -1.41
TOP3A-207ENST00000493648 KLHDC3Q9BQ90 382 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms