RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SLC39A7Q92504 469 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TCTN2Q96GX1 697 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 HSPA12BQ96MM6 686 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF558Q96NG5 402 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF382Q96SR6 550 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TAPBPLQ9BX59 468 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CHST5Q9GZS9 411 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MCOLN1Q9GZU1 580 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CXCL16Q9H2A7 254 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR51V1Q9H2C8 321 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZFYVE1Q9HBF4 777 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 UQCC1Q9NVA1 299 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PRMT7Q9NVM4 692 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CNOT2Q9NZN8 540 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 COMMD9Q9P000 198 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GSKIPQ9P0R6 139 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 A0A0U1RQF3 1178 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NDUFS8O00217 210 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ITGB1BP1O14713 200 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PRAF2O60831 178 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 IGHV2-5P01817 119 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GUSBP08236 651 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TYRP14679 529 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CALCRP30988 508 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CNR2P34972 360 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 THBS4P35443 961 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RPL3P39023 403 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SLC1A2P43004 574 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CSRP3P50461 194 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 DLX5P56178 289 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 DAOAP59103 153 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 UBE2MP61081 183 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RPL38P63173 70 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SLC10A1Q14973 349 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ELAVL1Q15717 326 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 C9orf64Q5T6V5 341 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 NCR3LG1Q68D85 454 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PRSS55Q6UWB4 352 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PNPLA1Q8N8W4 532 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR2L3Q8NG85 312 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 OR10A7Q8NGE5 316 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RNASE8Q8TDE3 154 aaKnown RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 TRAPPC12Q8WVT3 735 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF514Q96K75 400 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 PTCHD1Q96NR3 888 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SMOQ99835 787 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 BHLHE41Q9C0J9 482 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-205ENST00000493587 LAT2Q9GZY6 243 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 GABARAPL1Q9H0R8 117 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 RGCCQ9H4X1 137 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 ISYNA1Q9NPH2 558 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 SLC35A3Q9Y2D2 325 aa6.41□□□□□ -1.38
VPS13B-205ENST00000493587 MKI67P46013 3256 aaKnown RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ARID1AO14497 2285 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF587BE7ETH6 402 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 G3V3Q6 166 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ACKR2O00590 384 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 MOSPD3O75425 235 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 AK1P00568 194 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ARG1P05089 322 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 HEXAP06865 529 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 HOXB6P17509 224 aaKnown RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 RCC1P18754 421 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 TNFSF9P41273 254 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 DHPSP49366 369 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 PPIAP62937 165 aaKnown RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SIM1P81133 766 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM132DQ14C87 1099 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 RIPPLY2Q5TAB7 128 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 HIST2H3PS2Q5TEC6 136 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 OR2G6Q5TZ20 316 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SLC22A10Q63ZE4 541 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 VITQ6UXI7 678 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 TMPRSS11FQ6ZWK6 438 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 FAM131BQ86XD5 332 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 FBXO39Q8N4B4 442 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SLC24A4Q8NFF2 622 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 OR5M1Q8NGP8 315 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ESAMQ96AP7 390 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SCLYQ96I15 445 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 C7orf34Q96L11 122 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 OR14A2Q96R54 314 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ATF6BQ99941 703 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF670Q9BS34 389 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ATXN3LQ9H3M9 355 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 EPHX3Q9H6B9 360 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 RRAGCQ9HB90 399 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 EXOSC3Q9NQT5 275 aaKnown RBP6.4□□□□□ -1.38
VPS13B-205ENST00000493587 SERINC1Q9NRX5 453 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM45AQ9NWC5 275 aa6.4□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF282Q9UDV7 671 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms