RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ESRP2Q9H6T0 727 aaKnown RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 C12orf49Q9H741 205 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 POLE3Q9NRF9 147 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 RAP2CQ9Y3L5 183 aa11.11□□□□□ -0.63
COL6A1-205ENST00000492851 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-205ENST00000492851 NIPBLQ6KC79 2804 aaeCLIP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 RNF103-CHMP3A0A140T963 221 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 CNOT4O95628 575 aaKnown RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 NTN1O95631 604 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 HEXAP06865 529 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 NID1P14543 1247 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 PGCP20142 388 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ENPP1P22413 925 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 UQCRC2P22695 453 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 IL32P24001 234 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 LOXP28300 417 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ARRB2P32121 409 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ABCE1P61221 599 aaKnown RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 CSNK2A1P68400 391 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 TXNL4AP83876 142 aaKnown RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 LTBQ06643 244 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 QPRTQ15274 297 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 GPR68Q15743 365 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 AP1ARQ63HQ0 302 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ADAM5Q6NVV9 412 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 C22orf34Q6ZV56 151 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 YTHDF3Q7Z739 585 aaKnown RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 MED12LQ86YW9 2145 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 TUSC5Q8IXB3 177 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 GABRG1Q8N1C3 465 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 TMCO5AQ8N6Q1 288 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF611Q8N823 705 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 OR5AK3PQ8NH89 298 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 MIPOL1Q8TD10 442 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 SLC25A43Q8WUT9 341 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-205ENST00000492851 PLPPR2Q96GM1 343 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 SLC35G5Q96KT7 338 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 AKTIPQ9H8T0 292 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 BCO1Q9HAY6 547 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 PRDM4Q9UKN5 801 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 SLC35A3Q9Y2D2 325 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 KCNE3Q9Y6H6 103 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 MPDZO75970 2070 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 MED12Q93074 2177 aa11.1□□□□□ -0.63
COL6A1-205ENST00000492851 ABCA4P78363 2273 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 WDR91A4D1P6 747 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 HS3ST1O14792 307 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ANKRD28O15084 1053 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 EFNA2O43921 213 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 DNAJA2O60884 412 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 CSTAP01040 98 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 CREB1P16220 341 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 SLC1A6P48664 564 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 CLK1P49759 484 aaKnown RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ANXA11P50995 505 aaKnown RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 CCR4P51679 360 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 LRRC74AQ0VAA2 488 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ITGADQ13349 1161 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 CHI3L2Q15782 390 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 PDZK1Q5T2W1 519 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 HEPHL1Q6MZM0 1159 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 TFAP2EQ6VUC0 442 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 TRIML2Q8N7C3 387 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 OR5D16Q8NGK9 328 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 OR4A15Q8NGL6 344 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 RFWD2Q8NHY2 731 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ABHD3Q8WU67 409 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 TESCQ96BS2 214 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 PERPQ96FX8 193 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 TMEM204Q9BSN7 226 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
COL6A1-205ENST00000492851 NPIPA5A0A0B4J1W7 369 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ZNF724A8MTY0 619 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 NPIPA7E9PJI5 369 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 FCMRO60667 390 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 CYTIPO60759 359 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 GCM2O75603 506 aaPredicted RBP11.08□□□□□ -0.64
COL6A1-205ENST00000492851 UGT2B17O75795 530 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 CYP7B1O75881 506 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 ADAP00813 363 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 CD3EP07766 207 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 NPIPA8P0DM63 369 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 LBPP18428 481 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 SHC1P29353 583 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 PTH2RP49190 550 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 MAP2K6P52564 334 aa11.08□□□□□ -0.64
COL6A1-205ENST00000492851 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms