RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 COTL1Q14019 142 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MELKQ14680 651 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GANABQ14697 944 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RGNQ15493 299 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 KCNA10Q16322 511 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TIGD5Q53EQ6 642 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NKAPLQ5M9Q1 402 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM244Q5VVB8 128 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TAPT1Q6NXT6 567 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 EID2Q8N6I1 236 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GPRC5AQ8NFJ5 357 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR1S2Q8NGQ3 325 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR1J4Q8NGS1 313 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 OR51Q1Q8NH59 317 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CD99L2Q8TCZ2 262 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SNX33Q8WV41 574 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 XAGE5Q8WWM1 108 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SORCS1Q8WY21 1168 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 HIST1H2BAQ96A08 127 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MALSU1Q96EH3 234 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 CMTM7Q96FZ5 175 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZFP3Q96NJ6 502 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MTERF1Q99551 399 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TEAD3Q99594 435 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 GPR20Q99678 358 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MESP1Q9BRJ9 268 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SOX7Q9BT81 388 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC39A8Q9C0K1 460 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 POLR2J3Q9H1A7 115 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 DUSP15Q9H1R2 295 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TUBA4BQ9H853 241 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 MRPS30Q9NP92 439 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TLR8Q9NR97 1041 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 TVP23BQ9NYZ1 205 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 PTGFRNQ9P2B2 879 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 FAM50BQ9Y247 325 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 RASD1Q9Y272 281 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 KCNIP3Q9Y2W7 256 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NME7Q9Y5B8 376 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 NPFFR2Q9Y5X5 522 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ANK1P16157 1881 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ALPK3Q96L96 1907 aa4.44□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF646O15015 1829 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A087X0M5 115 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A1B0GVC2 190 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A1B0GX30 115 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A1W2PPE3 182 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2W5A6NFC9 320 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 A6NIN4 97 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CD8B2A6NJW9 211 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF891A8MT65 544 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NPIPB8E9PQR5 432 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 H3BN98 237 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MAN2B1O00754 1011 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 BCAT2O15382 392 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TMPRSS2O15393 492 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 FGF10O15520 208 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 GPR39O43194 453 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CLEC3AO75596 197 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2F2O95006 317 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CPSF4O95639 269 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CD2P06729 351 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ASGR2P07307 311 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 C1GALT1C1LP0DN25 315 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CD8BP10966 210 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CD79AP11912 226 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF35P13682 527 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ADRB3P13945 408 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PKMP14618 531 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TYRP1P17643 537 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CELP19835 753 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 C5AR1P21730 350 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NFYBP25208 207 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 S100A2P29034 98 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CCR1P32246 355 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR1E2P47887 323 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 RENBPP51606 427 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF140P52738 457 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PNLIPRP2P54317 469 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 WNT3P56703 355 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NUTF2P61970 127 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SUMO1P63165 101 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 FAM189BP81408 668 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PRR5P85299 388 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 BDH1Q02338 343 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NHLH2Q02577 135 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MBTD1Q05BQ5 628 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2F1Q13607 317 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 BOP1Q14137 746 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 DHCR24Q15392 516 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SIRPB2Q5JXA9 342 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 MARCH8Q5T0T0 291 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 OR52W1Q6IF63 320 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 SFXN4Q6P4A7 337 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM71Q6P5X7 295 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 PRSS55Q6UWB4 352 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 CD300LDQ6UXZ3 194 aa4.43□□□□□ -1.7
SNRNP40-206ENST00000489853 NHLRC1Q6VVB1 395 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms